Hi Doug and others, A while ago, I got this reply to my question below (thanks!). I tried to look in to it, but I am a bit confused (probably because I am very new to Freesurfer). My results are on the MNI 152, but I don't understand what you mean with 'run the mni152 through freesurfer'. Is this the process to get the register.dat file that is required in mri_vol2surf? What would you recommend to get the register.dat file? Is it possible to use bbregister for that? I have tried this, but I don't know whether it is correct:
bbregister --s fsaverage --mov con_0001.nii --init-spm --reg register.dat --bold Thanks! Lotte >If your results are on the MNI152, you can run the mni152 through >freesurfer, then use mri_vol2surf to map the data to the surface then >view it with freeview (or tksurfer). You should not confuse this with >doing the fMRI analysis on the surface. You will not have the benefits >of surface-based analysis On 02/15/2017 03:37 PM, Schoot, Lotte wrote: > Hi all, > > I was wondering if you knew of a way to display SPM results onto the > inflated surface in Freesurfer. > > I have tried using SurfRend but there seem to be problems which might > be due to the fact the results are obtained with SPM12 and SurfRend > was designed to work with SPM5. > > Thanks, > Lotte > > > _______________________________________________ > Freesurfer mailing list > Freesurfer at > nmr.mgh.harvard.edu<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center greve at nmr.mgh.harvard.edu<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> Phone Number: 617-724-2358 Fax: 617-726-7422
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