I would look for differences among 4 different groups (A, B, C, D).
e.g. I expected that the impaiment is A<B<C<D.
Thus, I should opt for G1+G3 vs G2+G4 or G1+G2 vs G3+G4? Other option?
Sorry, I'm confused on this matter and worried to produce correct results.
Thank you very much.
Best regards
Stefano

>----Messaggio originale----
>Da: "Douglas N Greve" <gr...@nmr.mgh.harvard.edu>
>Data: 20-apr-2017 17.07
>A: <freesurfer@nmr.mgh.harvard.edu>
>Ogg: Re: [Freesurfer] R: Re: R: Re: FSGD file FS-FAST
>
>
>
>On 04/19/2017 04:37 PM, std...@virgilio.it wrote:
>> I'm sorry but it not clear to me. There are 2 factors, 2 levels, while I 
have 1
>> Factor, 4 Levels
>It is still four groups.
>> In particular, have I looked to difference between Group1+Group2 vs
>> Group3+Group4?
>> Is it correct 0.5 -0.5 0.5 -0.5?
>That will give you G1+G3 vs G2+G4
>> Thanks
>>
>> Stefano
>>
>>> ----Messaggio originale----
>>> Da: "Douglas N Greve" <gr...@nmr.mgh.harvard.edu>
>>> Data: 19-apr-2017 19.23
>>> A: <freesurfer@nmr.mgh.harvard.edu>
>>> Ogg: Re: [Freesurfer] R: Re: FSGD file FS-FAST
>>>
>>> There is one for 4 Groups with 1 covariate. Use that one and do not
>>> include the covariate.
>>>
>>>
>>> On 04/19/2017 02:37 AM, std...@virgilio.it wrote:
>>>> I did not find it for for 4 Groups (1 Factor, 4 Levels), Zero Covariates.
>>>>
>>>> I need for check to avoid error on my analysis.
>>>> Please could you say me whether the followed codes are correct.
>>>>
>>>> A) Group effect
>>>> 1 -1 0 0
>>>> 1 0 -1 0
>>>> 1 0 0 -1
>>> This will generate an F test for the group effect
>>>> B) 0.5 0.5 -0.5 -0.5
>>> This looks like it will test a difference between Group1-and-2 vs
>>> Group3-and-4
>>>> Many thanks.
>>>>
>>>> Stefano
>>>>
>>>>
>>>>
>>>>      ----Messaggio originale----
>>>>      Da: "Douglas Greve" <gr...@nmr.mgh.harvard.edu>
>>>>      Data: 19-apr-2017 3.50
>>>>      A: <freesurfer@nmr.mgh.harvard.edu>
>>>>      Ogg: Re: [Freesurfer] FSGD file FS-FAST
>>>>
>>>>      Have you looked at
>>>>      https://surfer.nmr.mgh.harvard.edu/fswiki/FsgdExamples ?
>>>>
>>>>
>>>>      On 4/17/17 5:32 PM, std...@virgilio.it wrote:
>>>>>      Hi list,
>>>>>      please could you suggest me the group.effect.mtx and the file.mtx
>>>>>      relative to Null Hypothesis for 4 Groups (1 Factor, 4 Levels),
>>>>>      Zero Covariates. DODS or DOSS.
>>>>>      Thanks
>>>>>      Stefano
>>>>>
>>>>>
>>>>>      _______________________________________________
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>>>>>      Freesurfer@nmr.mgh.harvard.edu
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>>>>
>>>>
>>>>
>>>>
>>>> _______________________________________________
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>>> -- 
>>> Douglas N. Greve, Ph.D.
>>> MGH-NMR Center
>>> gr...@nmr.mgh.harvard.edu
>>> Phone Number: 617-724-2358
>>> Fax: 617-726-7422
>>>
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>
>-- 
>Douglas N. Greve, Ph.D.
>MGH-NMR Center
>gr...@nmr.mgh.harvard.edu
>Phone Number: 617-724-2358
>Fax: 617-726-7422
>
>Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
>www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>
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