Hi Elisabetta

we need more information than this if you want our help. What command did you run that failed? What was the screen output?

cheers
Bruce
On Thu, 13 Jul 2017, Del Re, Elisabetta wrote:


Dear FS team,

we are setting up FS 6.0 and have run one test case.

The run went through but only after we created a 001.mgz image.

It seems somewhat strange to us.

Thank you so much,

best,

Elisabetta









____________________________________________________________________________
From: [email protected]
<[email protected]> on behalf of [email protected]
<[email protected]>
Sent: Thursday, July 13, 2017 10:37 AM
To: [email protected]
Subject: [Freesurfer] 3G1V.fsgd  
Dear FS group,
I don't understand how I should build the contrast for 3 groups 1 covariate.
No specific example is provided within fsgd example and also other
colleagues report the same problem in the mail list.
Please could you provide us details on this topic?
Especially, how should be the g3v1.intercept and g31v.slope?

1 -1 0 0 0 0
1 0 -1 0 0 0
for g3v1.intercept.mtx

and 
0 0 0 1 -1 0
0 0 0 1 0 -1
for g3v1.slope.mtx 

are corrected?

Waiting for you very wellcome suggestions

Thanks and kind regards

Stefano

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