Many thanks!

In conclusion, you can confirm that the complete list of contrast reported 
below is corrected for 3g1v, please?

Contrast 1) HC-MCI_intercept.mtx
1 -1 0 0 0 0

Contrast 2) HC-MCI_slope.mtx
0 0 0 1 -1 0

Contrast 3) HC-AD_intercept.mtx
1 0 -1 0 0 0 

Contrast 4) HC-AD_slope.mtx
0 0 0 1 0 -1

Contrast 5) MCI-AD_intercept.mtx
0 1 -1 0 0 0

Contrast 6) MCI-AD_slope.mtx
0 0 0 0 1 -1

Contrast 7) effect.intercept.mtx
1 -1 0 0 0 0
1 0 -1 0 0 0

Contrast 8) effect.slope.mtx
0 0 0 1 -1 0
0 0 0 1 0 -1

Contrast 9) HC+MCI-vs-AD.intercept.mtx
0.5 0.5 -1 0 0 0

Contrast 10) HC+MCI-vs-AD.slope.mtx
0 0 0 0.5 0.5 -1

Kind regards,


Stefano


>----Messaggio originale----
>Da: "Douglas N Greve" <[email protected]>
>Data: 13-lug-2017 22.30
>A: <[email protected]>
>Ogg: Re: [Freesurfer] 3G1V.fsgd
>
>
>
>On 07/13/2017 10:37 AM, [email protected] wrote:
>> Dear FS group,
>>
>> I don't understand how I should build the contrast for 3 groups 1 
>> covariate.
>> No specific example is provided within fsgd example and also other 
>> colleagues report the same problem in the mail list.
>> Please could you provide us details on this topic?
>> Especially, how should be the g3v1.intercept and g31v.slope?
>>
>> 1 -1 0 0 0 0
>> 1 0 -1 0 0 0
>> for g3v1.intercept.mtx
>This is the main effect of group on the intercept regressing out the 
>effect of covariate.
>>
>> and
>> 0 0 0 1 -1 0
>> 0 0 0 1 0 -1
>> for g3v1.slope.mtx
>This is the main effect of group on the slope regressing out the effect 
>of group intercept.
>>
>>
>> are corrected?
>>
>> Waiting for you very wellcome suggestions
>>
>> Thanks and kind regards
>>
>> Stefano
>>
>>
>> _______________________________________________
>> Freesurfer mailing list
>> [email protected]
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>-- 
>Douglas N. Greve, Ph.D.
>MGH-NMR Center
>[email protected]
>Phone Number: 617-724-2358
>Fax: 617-726-7422
>
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