that is experimental to look at the "weight" of the cluster (ie, size*intensity)
On 08/11/2017 11:50 AM, Van Der Deijl, Rosanne wrote: > Thanks for the link, I hadn't seen that one indeed! > However, the variable WghtVtx is not explained on this page. What is > this variable? > > Thank you! > > Message: 8 > Date: Mon, 7 Aug 2017 15:01:46 -0400 > From: Douglas N Greve <[email protected]> > Subject: Re: [Freesurfer] mri_glmfit-sim output > To: [email protected] > Message-ID: <[email protected]> > Content-Type: text/plain; charset=windows-1252; format=flowed > > see here > https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysisClusterSummary > > > On 08/07/2017 02:40 PM, Van Der Deijl, Rosanne wrote: > > Dear Freesurfer team, > > > > In the mri_glmfit-sim summary output file, I get a number of output > > variables, and I'm not sure what some of them are. Could you explain > > the ones in bold to me? > > > > # ClusterNo Max VtxMax Size(mm^2) MNIX MNIY MNIZ *CWP > > CWPLow CWPH * NVtxs *WghtVtx* Annot > > 1 2.015 134872 355.89 -36.3 -9.7 -1.4 > > 0.96620 0.96390 0.96850 841 1298.68 insula > > 2 1.652 71259 154.25 -49.4 -52.7 39.2 > > 1.00000 -0.00010 1.00000 363 526.18 supramarginal > > 3 -1.521 91550 39.92 -37.1 -26.5 -23.3 > > 1.00000 -0.00010 1.00000 90 -125.33 fusiform > > 4 1.322 139141 0.76 -36.4 3.5 -10.7 > > 1.00000 -0.00010 1.00000 2 2.62 insula > > 5 1.312 73658 0.47 -36.0 -4.4 9.6 > > 1.00000 -0.00010 1.00000 1 1.31 insula > > 6 1.387 133422 0.44 -5.1 -17.2 51.7 > > 1.00000 -0.00010 1.00000 1 1.39 paracentral > > > > I know CWP stands for Cluster-wise P-value. But what is the low and > > the high number, a confidence interval? And isn't it odd that my > > p-values are (almost) 1? > > > > Thank you in advance. > > > > Kind regards, > > > > Rose > > > > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center [email protected] Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
