it just uses the annotation of the vertex with the maximum value. You can have it use the centroid by adding --centroid
On 08/18/2017 07:33 PM, Van Der Deijl, Rosanne wrote: > Dear Freesurfer team, > > I was wondering how the annotations for the clusters that came out of > mri_glmfit are picked. I am wondering because I have a cluster which > visually seems to cover mostly the insula (and with a previous set of > subjects this same cluster was annotated as the insula), but it is now > annotated as the superiortemporal (which it indeed also partly covers). > > Is just the region in which the largest part of the cluster lies > picked for annotation, or is it done p-value-wise or in some other way? > > Thank you in advance! > > Kind regards, > > Rose > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
