Hello, That worked! Thank you very much. Also, I am trying to understand the information given by mri_segstats and I can find info on the different arguments for the command but not on how to interpret the output. Any recommendations?
Thank you! Eva From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas Greve Sent: 22 August 2017 17:33 To: freesurfer@nmr.mgh.harvard.edu Subject: EXT: Re: [Freesurfer] Freesurfer tutorial try it without doing any reshaping. If that works, then I'll edit the wiki On 8/22/17 12:00 PM, Esteban, Eva(GE Healthcare) wrote: Good afternoon, I am new to Freesurfer and following the instructions to find out the Cortical Thickness of a Volume-defined ROI(http://surfer.nmr.mgh.harvard.edu/fswiki/VolumeRoiCorticalThickness), everything goes well until step 4. Even if I try to use -reshape-factor 7 as suggested, it reshapes it to 6 and so the next step gives an error because the segmentation is shaped to 7. Would anyone mind giving me some guidance on how to do it? Many thanks, Eva _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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