do you want it to regenerate the aseg? If not, then a). If so, then you
would just run autorecon2 (instead of autorecon2-cp)
cheers
Bruce
On Thu, 14 Sep 2017,
miracle ozzoude wrote:
I used the expert option for control points and manually edited the
aseg.presurf.mgz. Which is the
proper flag to use in other to incorporate the respective changes?
a) recon-all -autorecon2-cp -autorecon2-noaseg -autorecon3 -expert -parallel
-openmp 8
-bigventricles -3T -time
or
b) recon-all -autorecon2-cp -autorecon3 -expert -parallel -openmp 8
-bigventricles -3T -time
Thanks.
Best,
Paul
_______________________________________________
Freesurfer mailing list
[email protected]
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
