Hey Bruce, Could you elaborate on what steps you would need to change the number of corpus callosum segments (and grow them laterally), and how to specify the outputs name/format/location?
Thanks, Doug Douglas Merkitch Neurological Sciences Rush University Medical Center On Feb 19, 2018, at 11:11 AM, Bruce Fischl <fis...@nmr.mgh.harvard.edu<mailto:fis...@nmr.mgh.harvard.edu>> wrote: Rush Email Security **WARNING** This email originated from outside of Rush University Medical Center. **DO NOT CLICK* links or attachments unless you recognize the sender and know the content is safe. Remember, Rush IS will never ask for user ID information via email communication. Hi Ben we find the CC as the region where there is the largest left/right WM connection. We then orient it to be vertical and find principle directions, and divvy it up into however many segments you want (I think the default is 5 but this can be changed). We then grow it out laterally as far as your specify cheers Bruce On Mon, 19 Feb 2018, Benjamin Yeske wrote: Hello Freesurfer Experts, I was looking through your website to see if I could find any info/papers that explained what landmarks you use for segmenting the corpus callosum, but I couldn't find anything on the topic. Could you please point me to a paper or resource that explains how freesurfer captures the corpus callosum and what landmarks it use to segment it out? We'd like to be able to hand check this region for accuracy in our TBI patients brain scans. Thank you, Ben _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://urldefense.proofpoint.com/v2/url?u=https-3A__mail.nmr.mgh.harvard.edu_mailman_listinfo_freesurfer&d=DwIBAg&c=XxU8ngzB_WPJXKyiin_6iQ&r=GRn28rC6ssBi3WYtpTHXUZZiKgdhzFrFkzz7_Ref9iw&m=o-HX4g-0DDPR-CFACnA8BdG_NrDRvL_-xI-vhK8-ocY&s=W0IGBtdAcuGn0rbReeLbGYVambUb5xlQ89X4RvKsvv4&e= The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at https://urldefense.proofpoint.com/v2/url?u=http-3A__www.partners.org_complianceline&d=DwIBAg&c=XxU8ngzB_WPJXKyiin_6iQ&r=GRn28rC6ssBi3WYtpTHXUZZiKgdhzFrFkzz7_Ref9iw&m=o-HX4g-0DDPR-CFACnA8BdG_NrDRvL_-xI-vhK8-ocY&s=4qVlCah15ZA0We1kyzagb_lxCXQ1lt3egC6gXO-MRl8&e= . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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