External Email - Use Caution Hi Freesurfer developers,
I have executed the recon-all command using the T1 images but I would be interested in doing a reconstruction of the hippocampal subregions using for that purpose a higher resolution images (eg T2 or FLAIR) as input. I read here https://surfer.nmr.mgh.harvard.edu/fswiki/HippocampalSubfields that is possible make hippocampal segmentation using the T2 images, but if T2 images cannot be used as input to execute the recon-all in consecuence I can´t do the segmentation of hippocampal subfields or on the contrary the recon-all and the hippocampal subfields segmentation are two operations that can be executed independently ? I hope to have explained myself correctly Thanks in advance. Cheers 2018-05-03 18:28 GMT+02:00 Douglas N. Greve <dgr...@mgh.harvard.edu>: > No, not currently > > > On 05/03/2018 11:26 AM, M Janani wrote: > > > > Hi Team, > > > > I have one doubt. Can I input T2 weighted images for > > recon-all command? > > > > Regards, > > > > Janani > > > > ::DISCLAIMER:: > > ------------------------------------------------------------ > ------------------------------------------------------------ > ------------------------------------------------------------ > ------------------------------------------------------------ > -------------------------------------- > > The contents of this e-mail and any attachment(s) are confidential and > > intended for the named recipient(s) only. E-mail transmission is not > > guaranteed to be secure or error-free as information could be > > intercepted, corrupted, lost, destroyed, arrive late or incomplete, or > > may contain viruses in transmission. The e mail and its contents (with > > or without referred errors) shall therefore not attach any liability > > on the originator or HCL or its affiliates. Views or opinions, if any, > > presented in this email are solely those of the author and may not > > necessarily reflect the views or opinions of HCL or its affiliates. > > Any form of reproduction, dissemination, copying, disclosure, > > modification, distribution and / or publication of this message > > without the prior written consent of authorized representative of HCL > > is strictly prohibited. If you have received this email in error > > please delete it and notify the sender immediately. Before opening any > > email and/or attachments, please check them for viruses and other > defects. > > ------------------------------------------------------------ > ------------------------------------------------------------ > ------------------------------------------------------------ > ------------------------------------------------------------ > -------------------------------------- > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > -- *Miguel Ángel Rivas Fernández*
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