External Email - Use Caution        

Dear Lachian (and everyone),
I am SO sorry about this. I’ll be fixed very soon, I promise.
Cheers,
/Eugenio

--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Centre for Medical Image Computing (CMIC)
University College London
http://www.jeiglesias.com
http://cmictig.cs.ucl.ac.uk/


From: <[email protected]> on behalf of Lachlan Strike 
<[email protected]>
Reply-To: Freesurfer support list <[email protected]>
Date: Wednesday, 30 May 2018 at 07:42
To: "[email protected]" <[email protected]>
Subject: [Freesurfer] Subfields Development Version MATLAB:scriptNotAFunction


        External Email - Use Caution
Hi

I’m attempting to run the hippocampal/amygdala subfields segmentation in the 
most recent daily build of FreeSurfer (Centos7). The T1 only and multispectral 
variations run fine, but attempting the segmentation without the T1 (USE_T1=0) 
produces the following error:


Attempt to execute SCRIPT segmentSubjectT2_autoEstimateAlveusML as a function:
/tmp/MCR_3555778206/.mcrCache8.4/segmen0/segmentSubje/segmentSubjectT2_autoEstimateAlveusML.m

MATLAB:scriptNotAFunction
Error:Attempt to execute SCRIPT segmentSubjectT2_autoEstimateAlveusML as a 
function:
/tmp/MCR_3555778206/.mcrCache8.4/segmen0/segmentSubje/segmentSubjectT2_autoEstimateAlveusML.m
Linux vagrant 4.4.0-75-generic #96-Ubuntu SMP Thu Apr 20 09:56:33 UTC 2017 
x86_64 x86_64 x86_64 GNU/Linux


Any ideas? I am running this within a singularity container, but as the T1 and 
multispec versions ran without error I’m hoping it’s not related to that.


Thanks

Lachlan


Queensland Brain Institute
The University of Queensland, Australia
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