External Email - Use Caution Hi Bruce,
Thank you for your reply. I am sending now a file called 013.tar.gz via ftp. And this is not the worst...there are other with more regions that have not been considered in the segmentation process. I would like to know how could I cope with GM editions, as I am doing with control points with WM. Yours sincerely, Rosalia On Tue, Dec 11, 2018 at 5:17 PM Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: > Hi Rosalia > > if you upload an example with voxel coordinates of where you see problems > we will take a look > > cheers > Bruce > On Tue, 11 Dec 2018, Rosalia Dacosta Aguayo wrote: > > > > > External Email - Use Caution > > > > Dear Free Surfer team and Bruce, > > > > I have been doing well editing the skull stripping, and using control > points > > to improve white matter segmentation. Furthermore, the few participants I > > had problems with due to large ventricles were solved using the flag you > > recommended me to use. I am very grateful for all your help. > > > > However, I am facing another problem I thought I could solve using > control > > points as well but this is worsening things instead of improving them. I > > refer to grey matter segmentation. I have found that several > participants, > > more than I would like, are having problems with grey matter > segmentation in > > the ventral temporal lobes and in the occipital lobe as well. > > > > I wonder if you could kindly help me with this, telling me how I could > solve > > this problem so GM and WM segmentation are fine. > > > > Yours sincerely, > > Rosalia > > > > > > > >_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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