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Dear Sir，
I am wonder how to unsubscribe the mails likes ，
my mailbox is almost full and i can not recieve mails from my workmates
Shaoxun Yuan, PhD Candidate
State Key Laboratory of Bioelectronics
School of Biological Science and Medical Engineering
Southeast University, Nanjing, 210018, China
Phone:(86)18761869223
From: Iglesias Gonzalez, Eugenio
Date: 2019-01-16 23:03
To: Freesurfer support list
Subject: Re: [Freesurfer] Longitudinal Hippocampal Subfields - error during
segmentation {Disarmed}
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Hi Rachel,
Sorry I missed your previous email.
Would you mind uploading your subject(s), so I can take a look?
Cheers,
/E
--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Centre for Medical Image Computing (CMIC)
University College London
Research staff
Martinos Center for Biomedical Imaging
Massachusetts General Hospital
Research Affiliate
Computer Science and Artificial Intelligence Laboratory (CSAIL)
Massachusetts Institute of Technology
Lecturer on Radiology
Harvard Medical School
http://www.jeiglesias.com
From: <[email protected]> on behalf of Rachel Phillips
<[email protected]>
Reply-To: Freesurfer support list <[email protected]>
Date: Wednesday, 16 January 2019 at 09:37
To: Freesurfer support list <[email protected]>
Subject: Re: [Freesurfer] Longitudinal Hippocampal Subfields - error during
segmentation {Disarmed}
External Email - Use Caution
Any guidance on this error is appreciated. I am still receiving the same output
stated earlier.
Rachel Phillips
From: [email protected]
<[email protected]> on behalf of Rachel Phillips
<[email protected]>
Sent: Monday, January 7, 2019 9:11:47 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Longitudinal Hippocampal Subfields - error during
segmentation {Disarmed}
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Version 6.0
Thanks,
Rachel
From: [email protected]
<[email protected]> on behalf of Iglesias Gonzalez,
Eugenio <[email protected]>
Sent: Monday, January 7, 2019 2:50:57 AM
To: [email protected]; Freesurfer support list
Cc: Courtney Haswell
Subject: Re: [Freesurfer] Longitudinal Hippocampal Subfields - error during
segmentation {Disarmed}
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Hi Rachel
This is very weird. What exact version are you using? 6.0 or dev?
Cheers
Eugenio
Juan Eugenio Iglesias
ERC Senior Research Fellow
Centre for Medical Image Computing (CMIC)
University College London
Research staff
Martinos Center for Biomedical Imaging
Massachusetts General Hospital and Harvard Medical School
Research Affiliate
Computer Science and Artificial Intelligence Laboratory (CSAIL)
Massachusetts Institute of Technology
MailScanner has detected a possible fraud attempt from " www.jeiglesias.com
From: [email protected]
<[email protected]> on behalf of Rachel Phillips
<[email protected]>
Sent: Friday, January 4, 2019 7:43:45 PM
To: [email protected]
Cc: Courtney Haswell
Subject: [Freesurfer] Longitudinal Hippocampal Subfields - error during
segmentation
External Email - Use Caution
Hello,
I have run a longitudinal sample (up to 4 timepoints per subject) through the
Freesurfer 6.0 longitudinal processing pipeline, and currently I am attempting
to produce the longitudinal hippocampal subfield segmentation with the
following command: longHippoSubfieldsT1.sh <baseID> [SubjectsDirectory]. I am
receiving the following error: "Error using SegmentSubfeldsT1Longitudinal (line
441) The vector of prior probabilities in the mesh nodes must always sum to one
over all classes".
Below is an example of the output that precedes this error:
[ > In SegmentSubfieldsT1Longitudinal at 418]
Reading contexts of file
/usr/local/packages/freesurfer_v6.0.0/average/HippoSF/atlas/compressionLookupTable.txt
--------------
Making Lateral-nucleus map to reduced label 1
Making Paralaminar-nucleus map to reduced label 1
Making Basal-nucleus map to reduced label 1
Making Accessory-Basal-nucleus map to reduced label 1
Making Corticoamygdaloid-transitio map to reduced label 1
Making Central-nucleus map to reduced label 1
Making Cortical-nucleus map to reduced label 1
Making Medial-nucleus map to reduced label 1
Making Anterior-amygdaloid-area-AAA map to reduced label 1
--------------
Making alveus map to reduced label 2
Making Hippocampal_tail map to reduced label 2
Making HATA map to reduced label 2
Making fimbria map to reduced label 2
Making parasubiculum map to reduced label 2
Making hippocampal-fissure map to reduced label 2
--------------
Making Left-Cerebral-Cortex map to reduced label 3
--------------
Making Left-Cerebral-White-Matter map to reduced label 4
--------------
Making Left-Lateral-Ventricle map to reduced label 5
--------------
Making Left-choroid-plexus map to reduced label 6
--------------
Making Unknown map to reduced label 7
--------------
Making Left-VentralDC map to reduced label 8
--------------
Making Left-Putamen map to reduced label 9
--------------
Making Left-Pallidum map to reduced label 10
--------------
Making Left-Thalamus-Proper map to reduced label 11
--------------
Making Left-Accumbens-area map to reduced label 12
--------------
Making Left-Caudate map to reduced label 13
Error using SegmentSubfieldsT1Longitudinal (line 441)
The vector of prior probabilities in the mesh nodes must always sum to one over
all classes
Any guidance on this error would be greatly appreciated.
Thanks,
Rachel
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