That looks pretty awful. You should check the orig.nofix surfaces. I bet your data is extremely noisy
On 2/28/19 11:37 AM, Miguel Ángel Rivas Fernández wrote: > > External Email - Use Caution > > > Dear Freesurfer devs, > > > I ran the recon-all in one subject and and this process was stopped in > the topology correction. In particular during the "CORRECTING DEFECT > 36 (vertices=19847, convex hull=5892, v0=94733)". I reviewed the > lh.inflated.nofix and the lh.orig.nofix files in Freeview and I > noticed that the this error would be located in the lh.inflated.nofix > file. How can I fix this problem? > > I sent to you a screenshot of the lh.inflated.nofix file as well as > the recon-all.log file if you want take a look. > > > > Best regards, > > -- > *Miguel Ángel Rivas Fernández* > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
