This is a bug in mris_preproc. I have created a new version here https://gate.nmr.mgh.harvard.edu/safelinks/greve/mris_preproc Copy this to $FREESURFER_HOME/bin (after making a backup of the one that is there) let us know if this works
On 3/2/19 8:57 AM, Chenfei YE wrote: > > External Email - Use Caution > > Hi, > > I'm following the process described in https://www.cloudneuro.org/ to > predict age based on cortical thickness of an individual brain. > I cannot map surface to the fsaverage4 template by the 2nd command: > > recon-all -s subject.id -qcache -target fsaverage4 > > The error was shown like > > mri_surf2surf: could not read surface > ./test2/surf/lh.fsaverage4.sphere.reg > > No such file or directory > > I tried to change the 1st command like: > > recon-all -i input_image -s subject.id -all -target fsavearge4 > > But still the same error. > > My FreeSurfer version is 6.0.0. Maybe that's why I cannot successfully > run the code in https://www.cloudneuro.org/. But is there any way to > solve this problem? Thank you. > > Chenfei > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
