Only one mask and one threshold is used. If you need to combine masks in some way, you can use fscalc (or mri_binarize).
On 3/5/19 12:47 PM, Zhi Li wrote: > > External Email - Use Caution > > Hello Freesurfer experts, > > I would like to use mri_segstats with two different masks and > thresholds, such as: > > mri_segstats --mask mask1 --maskthresh thresh1 --mask mask2 > --maskthresh thresh2 > > This command can run smoothly with our any error. However, I am not > clear if the results are correct. I mean if mri_segstats uses the > overlap between two masks or only uses the last input mask and > threshold? Any suggestions? > > Thank you and best regards, > > Lizhi > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
