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In .Qdecrc file, you can only see this line, except you add somethings else. If 
all of these were settled down, it should work. Is there any error in your 
command windows? 

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From: Avi Gharehgazlou
Sent: Tuesday, April 23, 2019 2:27 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] LGI in QDEC menu please respond soon

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Where should I type "ctrl +H"? In my linux terminal (in QDEC) folder? when I do 
that it gives this error: bash: ctrl + H: command not found

When I open my .Qdecrc file (with geddit) I see the MEASURE1 = pial_lgi in the 
file (but not all the other lines that came in the output when I wrote command 
more ~/.Qdecrc)

On Tue, Apr 23, 2019 at 1:38 PM Pan Yunzhi <[email protected]> wrote:
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I guess the .Qdecrc file have already in your qdec folder. Try “ctrl + H” to 
see the hiden file and write MEASURE1 = pial_lgi into .Qdecrc file.
 
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From: Avi Gharehgazlou
Sent: Tuesday, April 23, 2019 1:34 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] LGI in QDEC menu please respond soon
 
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Yes I did
 
On Tue, Apr 23, 2019 at 12:59 PM Pan Yunzhi <[email protected]> wrote:
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Did you run this command “recon-all -s my_subject_id -qcache -measure pial_lgi” 
before? If not, you should run this.
 
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From: Avi Gharehgazlou
Sent: Tuesday, April 23, 2019 12:06 PM
To: Freesurfer support list
Subject: [Freesurfer] LGI in QDEC menu please respond soon
 
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Hi experts, 
To give more detail re my previous post....  I have created the .Qdecrc file in 
my Subjects directory and QDEC folder, which contains one line : MEASURE1 = 
pial_lgi . However, LGI is still not appearing in the drop down menu on QDEC. 
 
When I do command more ~/.Qdecrc it gives the following output:
 
 
# This file is automatically generated by the application
# If you change any lines or add new lines, note that all
# coments and empty lines will be deleted. Every line has
# to be in format: 
# key = value
#
Qdec1\Dialogs\ExitApplication = 0
Qdec1\Dialogs\SendErrorLog = 0
Qdec1\Geometry\MainPanelSize = 375
Qdec1\Geometry\MainPanelVisibility = 1
Qdec1\Geometry\SaveUserInterfaceGeometry = 1
Qdec1\Geometry\SecondaryPanelSize = 250
Qdec1\Geometry\SecondaryPanelVisibility = 0
Qdec1\Geometry\ViewPanelPosition = Right
Qdec1\Geometry\WindowGeometry = 900x700+531+190
Qdec1\RunTime\MostRecentVersionLaunched = 1.5
Qdec1\RunTime\PrintTargetDPI = 100.000000
Qdec1\RunTime\ShowBalloonHelp = 1
Qdec1\RunTime\ShowSplashScreen = 1
Qdec1\RunTime\ToolbarFlatButtons = 1
Qdec1\RunTime\ToolbarFlatFrame = 1
 
Based on previous archives I think my .Qdecrc was not saved properly because 
the line in this file (MEASURE1 = pial_lgi) doesn't appear in the above output. 
I know I have to put this line in the above output, but I can't seem to figure 
out how. Will you please be able to tell me how I can do this?
Thanks so much  
 
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