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After running preproc-sess on fmri data, bbr-sum was 0.94. After looking through images of template.nii.gz with register.dof6.lta file, I found that coronal and axial views of template(w/ registration applied) are switched. $preproc-sess -s sess01 -fsd rest -surface fsaverage lhrh -mni305 -fwhm 5 -per-run Is there any possible error that I might have made? or is there any way to fix it? I appreciate your help! Thanks, Wenzhen _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer