External Email - Use Caution I would recommend GNU parallel. I have 2 scripts here:
https://github.com/dfsp-spirit/shell-tools/tree/master/gnu_parallel_reconall_minimal and an explanation of what they do and how to use them at https://www.xsmd.org/brain/2019/03/13/using-gnu-parallel-to-speedup-neuroimaging You need to adjust some stuff, but they should get you going. You need the Bash shell and GNU parallel installed. Best, Tim > On September 18, 2019 at 3:07 PM Dev vasu > <vasudevamurthy.devulapa...@gmail.com> wrote: > > > External Email - Use Caution > > Dear all, > > I am using - openmp 30 to run recon-all, i see now change in the execution > time period. > > Could you please highlight me a method to reduce the execution time for > recon-all, if possible some parallel script to do that same. > > > Thanks > Vasudev > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Dr. Tim Schäfer Postdoc Computational Neuroimaging Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy University Hospital Frankfurt, Goethe University Frankfurt am Main, Germany _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
