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Hi,

Looking through the documentation, there are extra options to include a T2 
image to refine the pial surface boundary, but I was wondering if FreeSurfer 
can use a T2 in conjunction with a T1 to help refine the white matter/gray 
matter boundary? As in, gray matter with higher myelin content than average 
could cause the white matter boundary to be placed further out than normal when 
just using a T1; can FreeSurfer currently use a T2 image to help prevent that 
at all? Thank you

-Matt


Matthew K. Defenderfer B.S. | Graduate Research Assistant

Graduate Biomedical Sciences | Neuroscience

UAB | The University of Alabama at Birmingham

Laboratory of Kristina Visscher, PhD

Department of Neurobiology

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