You probably need to grant freeview permission to access your files and
folders if you have not. You can check in System Preferences.
Ruopeng
On 1/23/20 2:16 PM, Tarui, Tomo wrote:
External Email - Use Caution
Dear Freesurfer community,
I have been also experiencing problem that freeview froze when I tried
to select and open a new volume file.
This started after I upgraded mac OS X to Catalina. Until that I have
been using freeview fine for five years.
Error message said
Last login: Thu Jan 23 13:43:03 on ttys000
[tup09900bj11:~] tomotarui% setenv FREESURFER_HOME
/Applications/freesurfer
[tup09900bj11:~] tomotarui% source $FREESURFER_HOME/SetUpFreeSurfer.csh
-------- freesurfer-Darwin-OSX-stable-pub-v6.0.0-2beb96c --------
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME /Applications/freesurfer
FSFAST_HOME /Applications/freesurfer/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DIR /Applications/freesurfer/subjects
MNI_DIR /Applications/freesurfer/mni
FSL_DIR /usr/local/fsl
[tup09900bj11:~] tomotarui% freeview
2020-01-23 13:54:35.305 Freeview[3205:65482] modalSession has been
exited prematurely - check for a reentrant call to endModalSession:
I do have read permissions for those volume files when I checked with
ls -l and mri_info.
I have tried cleaned up and reinstall freesurfer, which did not solve
the problem.
It may be unique to my computer, but I would appreciate very much for
any recommendation.
Tomo
The information in this e-mail is intended only for the person to whom
it is addressed. If you believe this e-mail was sent to you in error
and the e-mail contains patient information, please contact the Tufts
Medical Center HIPAA Hotline at (617) 636-4422. If the e-mail was sent
to you in error but does not contain patient information, contact the
sender and properly dispose of the e-mail.
Please consider the environment and the security of the information
contained within or attached to this e-mail before printing or saving
to an insecure location.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer