You probably need to grant freeview permission to access your files and folders if you have not. You can check in System Preferences.

Ruopeng

On 1/23/20 2:16 PM, Tarui, Tomo wrote:

        External Email - Use Caution

Dear Freesurfer community,

I have been also experiencing problem that freeview froze when I tried to select and open a new volume file. This started after I upgraded mac OS X to Catalina. Until that I have been using freeview fine for five years.

Error message said

Last login: Thu Jan 23 13:43:03 on ttys000
[tup09900bj11:~] tomotarui% setenv FREESURFER_HOME /Applications/freesurfer
[tup09900bj11:~] tomotarui% source $FREESURFER_HOME/SetUpFreeSurfer.csh
-------- freesurfer-Darwin-OSX-stable-pub-v6.0.0-2beb96c --------
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME /Applications/freesurfer
FSFAST_HOME /Applications/freesurfer/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DIR /Applications/freesurfer/subjects
MNI_DIR /Applications/freesurfer/mni
FSL_DIR           /usr/local/fsl
[tup09900bj11:~] tomotarui% freeview
2020-01-23 13:54:35.305 Freeview[3205:65482] modalSession has been exited prematurely - check for a reentrant call to endModalSession:

I do have read permissions for those volume files when I checked with ls -l and mri_info. I have tried cleaned up and reinstall freesurfer, which did not solve the problem. It may be unique to my computer, but I would appreciate very much for any recommendation.
Tomo


The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Tufts Medical Center HIPAA Hotline at (617) 636-4422. If the e-mail was sent to you in error but does not contain patient information, contact the sender and properly dispose of the e-mail.

Please consider the environment and the security of the information contained within or attached to this e-mail before printing or saving to an insecure location.


_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Reply via email to