External Email - Use Caution Hi Bruce,
The only pre-processing I have done is the motion correction, high pass filtering and distortion correction. So, as far as I know it is still in the volume and in the original functional space. Best wishes, Mason Mason T Wells, MSc PhD student School of Optometry and Vision Sciences & Cardiff University Brain Research Imaging Centre (CUBRIC), School of Psychology Cardiff University Cardiff CF24 4HQ UK Email: wells...@cardiff.ac.uk Tel: 02920 879628 Web: Cardiff University webpage <https://www.cardiff.ac.uk/people/research-students/view/974214-> Mason T Wells, MSc Myfyriwr PhD Yr Ysgol Optometreg a Gwyddorau’r Golwg & Canolfan Ymchwil Delweddu’r Ymennydd Prifysgol Caerdydd (CUBRIC), Yr Ysgol Seicoleg Prifysgol Caerdydd Heol Maindy Caerdydd CF24 4HQ DU E-bost: wells...@caerdydd.ac.uk Ffôn: 02920 879628 On 17/04/2020, 15:11, "freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Bruce Fischl" <freesurfer-boun...@nmr.mgh.harvard.edu on behalf of fis...@nmr.mgh.harvard.edu> wrote: Hi Mason is your filtered_func file already sampled onto the surface or is it a volume? cheers Bruce On Fri, 17 Apr 2020, Mason Wells wrote: > > External Email - Use Caution > > Hi all, > > > > I am trying to use an analysis package that works on surface based data > (SamSrf). I have ran Feat and have a filtered_func file which is of course > the motion corrected/unwarped version of my EPI. However, I need some advice > on how to get these data onto the Freesurfer surface. I have found this > page, but I wanted to double check this is the most up-to-date pipeline. On > the page it suggests using the same DOF as used in Feat, I use BBR so this > seems a little redundant. Has anyone on these lists got any experience of > getting filtered_func onto the Freesurfer surface? > > > > Thanks in advance, > > Mason > > > > > > Mason T Wells, MSc > > PhD student > > School of Optometry and Vision Sciences > > & Cardiff University Brain Research > > Imaging Centre (CUBRIC), School of Psychology > > Cardiff University > > Cardiff > > CF24 4HQ > > UK > > > > Email: wells...@cardiff.ac.uk > > Tel: 02920 879628 > > Web: Cardiff University webpage > > Mason T Wells, MSc > > Myfyriwr PhD > > Yr Ysgol Optometreg a Gwyddorau’r Golwg > > & Canolfan Ymchwil Delweddu’r Ymennydd Prifysgol Caerdydd (CUBRIC), Yr Ysgol > Seicoleg > > Prifysgol Caerdydd > > Heol Maindy > > Caerdydd > > CF24 4HQ > > DU > > > > E-bost: wells...@caerdydd.ac.uk > > Ffôn: 02920 879628 > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
