The voxels are boxes
In coronal we have been using the uncus to divide in anterior vs posterior.
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve
<dgr...@mgh.harvard.edu>
Sent: Monday, May 11, 2020 2:25 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Hippocampus {Disarmed}
And how do you want to define your voxel? As a bounding box around a particular
structure (or structures)? Which ones?
On 5/11/2020 2:12 PM, Del Re, Elisabetta wrote:
Hi Douglas,
basically yes.
Thank you so much,
Elisabetta
________________________________
From:
freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
<freesurfer-boun...@nmr.mgh.harvard.edu><mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
on behalf of Douglas N. Greve
<dgr...@mgh.harvard.edu><mailto:dgr...@mgh.harvard.edu>
Sent: Monday, May 11, 2020 1:15 PM
To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
<freesurfer@nmr.mgh.harvard.edu><mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Hippocampus {Disarmed}
I'm still not sure what you are asking for. Do you want coordinates for your
MRS voxels for each subject?
On 5/11/2020 12:53 PM, Del Re, Elisabetta wrote:
I'm trying to recreate the same freesurfer subdivision during MRS acquisition
of 2 voxels for anterior and posterior hippocampus. I am trying to find a way
to be consistent and recreate the two big freesurfer anterior/posterior voxels.
I am looking for suggestions
________________________________
From:
freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
<freesurfer-boun...@nmr.mgh.harvard.edu><mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
on behalf of Iglesias Gonzalez, Juan E.
<jiglesiasgonza...@mgh.harvard.edu><mailto:jiglesiasgonza...@mgh.harvard.edu>
Sent: Monday, May 11, 2020 12:18 PM
To: Freesurfer support list
<freesurfer@nmr.mgh.harvard.edu><mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Hippocampus
Dera Elisabetta,
Can you please give us some more detail on what you mean by “I am trying to
translate the same subdivision to MRI acquisition for spectroscopy purposes.”?
Cheers,
/E
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
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Reply-To: Freesurfer support list
<freesurfer@nmr.mgh.harvard.edu><mailto:freesurfer@nmr.mgh.harvard.edu>
Date: Monday, May 11, 2020 at 09:42
To: "freesurfer@nmr.mgh.harvard.edu"<mailto:freesurfer@nmr.mgh.harvard.edu>
<freesurfer@nmr.mgh.harvard.edu><mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Hippocampus
Dear Freesurfer team,
I have analyzed the anterior/posterior hippocampus successfully utilizing FS6.0.
I am trying to translate the same subdivision to MRI acquisition for
spectroscopy purposes.
Do you have suggestions?
Thank you very much,
regards,
Elisabetta
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