External Email - Use Caution Is there a way to pass an already corrected brainmask file or force the function to do that so all the subsequent surf are created accordingly without using after mri_binarize?
On Fri, 5 Jun 2020, 7:52 p.m. Douglas N. Greve, <dgr...@mgh.harvard.edu> wrote: > mri_watershed creates brainmask.mgz, and the inner_skull should fit around > that. > > On 6/3/2020 9:36 AM, Edoardo Pinzuti wrote: > > External Email - Use Caution > Dear Freesurfer community, > > I have a question regarding the mri_watershed. Is the inner_skull > extracted from the brain.mgz which gets masked by the > brainmask.mgz automatically? > > Thanks > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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