you're not running it correctly. Run it with just --help to get info on
how to set up the command line
On 6/17/2020 3:48 AM, Ian Hardingham wrote:
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Hi Doug, just an FYI that I think this requires extra recon-all files
that are only output by v7 ?
./mri_segcentroids --i freesurfer/surf --o results.txt
error: corRead(): can't open file freesurfer/surf/COR-.info
On 16/06/2020 15:44, Douglas N. Greve wrote:
Yes, I put a linux version here
https://gate.nmr.mgh.harvard.edu/safelinks/greve/mri_segcentroids
On 6/16/2020 10:32 AM, Ian Hardingham wrote:
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Is this only in FSL 7 Doug? I can't find it in 6.
On 16/06/2020 14:59, Douglas N. Greve wrote:
Try mri_segcentroids. Run it with --help to get docs
On 6/16/2020 8:39 AM, Ian wrote:
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Hi Freesurfers.
I'm looking to find the center of the various Ventricles. Are
they included in the freesurfer segmentation images with a
specific code?
If not, what approach would you use?
Thanks,
Ian
--
*Ian Hardingham*
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