They will not look exactly the same. Try adding --ribbon ribbon.mgz
On 7/6/2020 10:47 PM, Sam W wrote:
External Email - Use Caution
Hi,
I'm trying to understand mri_surf2vol and mri_vol2surf but I'm not
able to get the expected output when converting a surface back to volume.
These are the commands I'm using:
mri_vol2surf --mov lh_fusiform_pre.nii.gz --ref mri/orig.mgz
--regheader sub01 --o lh_fusiform.gii --hemi lh
mri_surf2vol --o lh_fusiform_post.nii.gz --subject sub01 --so
surf/lh.white lh_fusiform.gii
shouldn't lh_fusiform_pre and lh_fusiform_post look the same?
lh_fusiform_post looks fragmented.
Best regards,
Sam
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
