External Email - Use Caution        

Dear expert

I'm trying to perform FC seed ROI analysis through FSfast pipeline
After preprocessing I run:
selxavg3-sess -s subject1 -a fsrest.surf.lh -no-con-ok -svres

but I got the following error:
ERROR: /bin/bash:
/scratch/tp9f57a7bb_2ea1_450b_b0e8_8cdd47a2eb8b.load_nifti.m.nii: No such
file or directory
ERROR: loading
/home/user/Desktop/test/subjects/subject1/fsrest/001/fmcpr.sm5.self.lh.nii.gz
as analyze
ERROR: attempting to read
/home/user/Desktop/test/subjects/subject1/fsrest/001/fmcpr.sm5.self.lh
------------------------------------------
ERROR: fast_selxavg3() failed\n

Moreover, I'm a bit confused how to compute whole brain seed-ROI surface
map, using a pre-specified seed ROI created in orig.mgz space (sphere 5mm)

Thanks in advance,
Lorenzo
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Reply via email to