Hi Octavian
1. Yes, there is a write_annotation.m that you can use. 2. We output an annot of the max probability labels at each point I think called BA_exvivo.thresh.annot Cheers Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Octavian Lie Sent: Friday, January 8, 2021 11:26 AM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] write .annot files External Email - Use Caution Dear All, These are probably rookie questions. 1. I can read an .annot file with read_annotation.m, is there a way to write one? (for example read it to matlab, modify, and save, or create a combined (lh+rh) aparc.annot file etc. 2. On the same line, how one combines all the Brodmann labels into a Brodmann parcellation, if not done already.. Thank you, Octavian
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