External Email - Use Caution
Hi Anastasia
It is working!-thanks so much for your help.
Regards,
Shanika
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Yendiki, Anastasia
<ayend...@mgh.harvard.edu>
Sent: Thursday, March 18, 2021 12:26 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] TRACULA error: missing output volume name
Hi Shanika - Can you try separating the "=" signs from the variable names in
the config file with a space?
Best,
Anastasia.
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Shanika Jayakody
<shanika.jayak...@einsteinmed.org>
Sent: Thursday, March 18, 2021 9:55 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] TRACULA error: missing output volume name
External Email - Use Caution
External Email - Use Caution
Hi Anastasia
Thanks so much for your reply. I have attached herewith the scripts/log file
-please let me know if you need anything else.
Regards,
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Yendiki, Anastasia
<ayend...@mgh.harvard.edu>
Sent: Wednesday, March 17, 2021 5:40 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] TRACULA error: missing output volume name
Hi Shanika - Can you please send the full log file from scripts/trac-all.log?
It's hard to figure out what causes the error without seeing the full output.
Nothing looks unusual in the config file.
Thanks,
Anastasia.
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Shanika Jayakody
<shanika.jayak...@einsteinmed.org>
Sent: Wednesday, March 17, 2021 4:04 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] TRACULA error: missing output volume name
External Email - Use Caution
External Email - Use Caution
Dear FreeSurfer team
I have been running TRACULA for some time now but recently, I come across a
message "missing output volume name" and I cannot do preprocessing in new or
old subjects (even subjects who completed preprocessing without error)
I have not made any change to the configuration files. It is the same format
that I have been using.
Any advice on this is appreciated. I have attached one of the configuration
files.
Thanks,
Shanika
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
