REgister the FDG to the anatomical (mri_coreg --s subject --mov fdg.nii
--reg fdg.reg.lta), sample the FDG into the anatomical space
(mri_vol2vol --mov fdg.nii --reg fdg.reg.lta --fstarg --o fdg.anat.mgz),
the use mri_segstats --seg
rh.hippoAmygLabels-T1.v21.FS60.FSvoxelSpace.mgz --i fdg.anat.mgz --sum
sum.dat
On 5/3/2021 12:48 PM, Mohammad Akradi wrote:
External Email - Use Caution
Dear Freesurfer Development Team
I've used freesurfer with hippocampal subfields module to get GM and
Thickness in this region in detail. but now I need this subfields'
mask to use it on my PET data. So I'll appreciate it if you tell me
how I can get this regions' mask. Or which atlas I should use to
achieve them? so I can calculate FDG uptake in these regions too.
best regards
--
Mohammad Akradi
MSc Student,
Institute of Medical Science and Technology,
Shahid Beheshti University, Tehran, Iran
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