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Good morning,

I am working with NODDI data and have created surface overlays in FreeSurfer 
space with NODDI values. I am interested in calculating vertex-wise asymmetry 
indexes utilizing fsaverage_sym similar to Greve et al Journal of Cognitive 
Neuroscience 25:9, pp. 1477–1492. I would ultimately like to extract average 
AIs for an ROI analysis. My question is how do I extract the overlay stats from 
the surface overlay mgh file to obtain average AI in each ROI?

Thanks!
Jim Gugger

James Gugger, MD, PharmD
Instructor of Neurology
University of Pennsylvania
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