try $FREESURFER_HOME//matlab/annotval2surfoverlay.m
On 6/25/2021 2:55 PM, Fischl, Bruce wrote:
I guess doing it in matlab would be easiest
*From:* freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> *On Behalf Of *Hye Min Shin
*Sent:* Friday, June 25, 2021 1:24 PM
*To:* freesurfer@nmr.mgh.harvard.edu
*Subject:* Re: [Freesurfer] Calculating group-wise Dice Similarity
Coefficient and corresponding surface map
* External Email - Use Caution *
Thank you for the response Bruce.
I apologize for the confusion regarding surface map but what I was
trying is that I wanted to create a surface file that contains dice
coefficients for labels across the entire cortex. With your response,
I think I can get the average dice coefficient for each label and
hopefully create a surface map that visualizes dice coefficients on
brain surface map.
Would there be a way to create my own surface map with brain
morphometry values that I created?
Best,
Julia Shin
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