External Email - Use Caution
Dear Doug,
Thank you for the announcement of 7.2.0 update.
I updated using freesurfer-linux-ubuntu18_amd64.tar.gz and noticed that the
'mni' directory is missing.
As a result, now the shell shows warning about MNI
=====
-------- freesurfer-linux-ubuntu18_x86_64-7.2.0-20210714-aa8f76b --------
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME /usr/local/freesurfer/7.2.0
FSFAST_HOME /usr/local/freesurfer/7.2.0/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DIR /home/username/freesurfer/7.2.0/subjects
WARNING: MINC_BIN_DIR not defined.
'nu_correct' and other MINC tools
are used by some Freesurfer utilities.
Set NO_MINC to suppress this warning.
WARNING: MINC_LIB_DIR not defined.
Some Freesurfer utilities rely on the
MINC toolkit libraries.
Set NO_MINC to suppress this warning.
FSL_DIR /usr/local/fsl
=====
Is it intended?
Best regards,
Kiyotaka
On Tue, Jul 20, 2021 at 7:45 AM Douglas N. Greve <dgr...@mgh.harvard.edu>
wrote:
> We are please to announce version 7.2. Mostly bug fixes and
> behind-the-scenes enhancements. But there are a few new goodies and one
> new "known issue" about defacing. Check out
> https://secure-web.cisco.com/1Nq7OG4aqL5Xu5zmIj8jgt_aBH5sIzltmYEnh37LRCC02zUZJGtxhXjbr0RAoJKh7BtiL6-idjNjfiQdlADO4shk7DLtd9JwfjdpLzmw9--jn4lSaFUiwRrKjViNKHZQtQQPksweoYvQiKRJ-y0-kRCdPvOF3aK5lht5Pyc-LXUG4if3vb5foaGHGQb-9RCQhVi2Fen9Qpcz-5KsV8t2xasvxlBFP9nxk2X0URW-y0xEiEjnPng_y6WFgp42hIhMR-bF4VfXTbQTXEZX37XNcKg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes
> doug
>
>
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--
Kiyotaka Nemoto, M.D., Ph.D.
Associate Professor
Department of Psychiatry
Division of Clinical Medicine, Faculty of Medicine
University of Tsukuba
1-1-1Tennodai Tsukuba, Ibaraki 305-8575, Japan
E-mail: kiyot...@nemotos.net
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