can you send the recon-all.log file?
On 8/30/2021 3:54 AM, 朱子家 wrote:
> External Email - Use Caution
>
> Hello FreeSurfer Developers,
>
> when I run the recon-all command:
>
> $ export SUBJECTS_DIR=`pwd`
> $ cd /lustre/home/acct/zjzhu/project/zzu_MRI/T1/test
> $ ls *nii | parallel --jobs 12 recon-all -s {.} -i {} -all -qcache
>
> I get the following error
>
> ERROR: mri_ca_register with non-zero status 11
> recon-all -s co20160131_165733 exited with ERRORS at Mon Aug 30 13:57:15
> CST 2021
>
> I've searched the list and no similar errors have been reported. Does anyone
> have any thoughts on how to trouble-shoot this one? Also, Ive attached the
> recon-all.log in case it's of any use.
>
> 1) FreeSurfer version: freesurfer-linux-centos7_x86_64-7.1.1-20200723-8b40551
> 2) Platform: CentOS Linux release 7.7.1908 (Core)
> 3) Linux login1.pi.sjtu.edu.cn 3.10.0-1062.el7.x86_64 #1 SMP Wed Aug 7
> 18:08:02 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux
> 4) recon-all.log: see attached
>
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