Hi Gonzalo - The input to TRACULA can be any file that can be converted to nifti by mri_convert. See: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Tracula#line-156
Anastasia. ________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Gonzalo Rojas Costa <gonzalo.rojas.co...@gmail.com> Sent: Friday, April 22, 2022 11:10 AM To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] TRACULA question External Email - Use Caution Hi: Is it possible to use input diffusion files in MOSAIC IMA Siemens file format directly? Or is it necessary to convert to nifti file format first? Sincerely, Gonzalo Rojas Costa Laboratory for Advanced Medical Image Processing Department of Radiology ClĂnica las Condes Lo Fontecilla 441, Las Condes, Santiago, Chile. Tel: 56-2-2105170 Cel: 56-9-97771785 https://secure-web.cisco.com/13PUT3U3zuLu0QBvcZiGdm18njGuoQr6dUsSQj9e5H3gOiFfFDIQfzquemma2IXSELZNdhFwGi3w3goGxGPnOUdDoh9pHJjjlEzyWgHhOvtSI1rWfiptKHRGKPqroO3HfU5LOzYece7gEBewcRdacnxbyoGkrInzayFlpCHDwMovVj2RsZXoAPA1TJD0c6qPpjpyNdRSfvWEQjlWFseO0XmY2GzERvEGLNZ2jVD7cFivFtsBZI6QKXubnoVYv7ZIhYdk8IDuEDnUGkM6aGN0fQdo0EfKqqQ5mvrA_-URQ1HAlx7fGFKcWaS-msf5JV3UYewMKh29ySoudmFsGrqP2Jg/https%3A%2F%2Fscholar.google.com%2Fcitations%3Fuser%3DLO7LZ3oAAAAJ https://secure-web.cisco.com/1TdZ-Zm0eaCvN4RyCzzXuq6HNPTVfbbxwGyNTIGMGFiRfybDhlZfcJej5DuQlBFxYwDJwSO1NbZisBp1yVrq7nyw2kMBF6oos5kUwQY5n5PaU_F0e5FlhFPXN8jHJ9-2ZjvCR48B8WX_Z98dUDwJgPDp6W5J9Qx86YoNJpPWxzK2nlRZBUv4m4xJZ1yZl8bc-y_rLC_yBmefTddoYvHRgxm-Sx-sI3urGbmLlgo1GW0ejAy5O87MgIVb9l10EMEi9Scz6WXE-mZCKUDK68bg0_py0KqpFw23M8fQvUlt-KsNQxJKwM0xjpEwDF8JFFDEW1fwAuuxSsUuDnVYZUTIW-g/https%3A%2F%2Fwww.researchgate.net%2Fprofile%2FGonzalo_Rojas2 https://secure-web.cisco.com/1lJu3jBI0nOfv9_IwBeCbcBNGA2K6pj5tSumDqMfk3ZItRd8BPyGam7Jzi5vwYgKSWZn_h3NHNpB-2LvnR0NG2dicPxcNLIMT9-kyIhxlIVn9KJDnI0UkMvvB_bwD35c9Wo8ZgYrmeeME-Xhopc25SP0b4uZ_ac8eyRU7siPGYplCIdV_wlbcpaf4QKngZ0GQ0OlKTSFA0kUvGppEUPh0dKLd1GGfVI7ta1xtDWAEeQDRZIJPDNENvLEMET8cajKIPIxhR0Pj9mFACW91chNeZqqgUH-RWTQD6lH1n-FqHFhQVN7buFLIgM89GsJppvGFD4sZGKjuTmnCpl4rS9rfaw/https%3A%2F%2Fcvn.fecyt.es%2F0000-0002-6228-2678 http://secure-web.cisco.com/1vs-E3PvUdSdie9Xm5LpQNiLpowx1KB-bnADkKZ76Vp4VANi--BPTBe90wM8SCdFK734_gIbmMr3PBFV4ZJOOJBA24RG16y2k3uomDr6zt-G7miVY8bETh1mVxRJXumLpmc3Yy3dH2PFE6uhzJNvuE5hUZqhTfQw-X7c4anBMhN_zYMez258yi_VwfB2Bz28yNTA0qClOp844_ELq3fX0tWSuBqUJmcCh8gyVYmA64LHU5lnFXwPdUjWzaoH9ZZ273niweURIdtncHPz5NN3wKifGl9r1dIbi8P9MG0Z64fjTArReR1NbSk-Z64E3_nvqJ-7Si7om181qm26Y05GJJQ/http%3A%2F%2Fwww.researcherid.com%2Frid%2FB-2036-2013 https://secure-web.cisco.com/1FM_I0dgNRRtoYqJmIXPdHgx__9woRyRSo5bnLSxgt51fCtFxOKP6SAvGDvzMdI6MlI8dr1A-GDLm7Ugbz4xQx_eBa-r6rF_KXZvcjQcG7c3HVqDBJ5Osza-xTwzP_JY8XT3vlujEpbz8lruWJRubpiv8DahDeUMtd6pNWEUHJagvmUDsyMHXbd1pm-XmpTmfa1RXkgkyaVwFfLwauPMJh4WFhchF7wz1ikJ8evtbLmu13H0jH_fCDLhFjkQlIHGSX4u1iiBtVtWcQQBc3tYacYBQNS-ly18qBzxa6Ebq21iyHPLMQ5lsZwvlRZoZl9d53xxdrTkwCPcwwkvO1szKIQ/https%3A%2F%2Fcl.linkedin.com%2Fin%2Fgonzalorojascosta _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.