not sure. Try running
mri_sclimbic_seg --i GP0050/mri/orig.mgz --o junk.mgz
On 8/4/2022 4:20 PM, Zeng, Victor (BIDMC - Keshavan - Psychiatry) wrote:
External Email - Use Caution
Hi all,
I am receiving this error when trying to run sclimbic module. It's not
being very descriptive about what the error is so I was wondering if
you all can help debug. My SUBJECTS_DIR is correct
mri_sclimbic_seg --s GP0050
/usr/local/freesurfer/dev7/python/scripts/mri_sclimbic_seg --s GP0050
Excluding seg [853]
Using CPU
Using 1 thread(s)
Loaded lookup table /usr/local/freesurfer/dev7/models/sclimbic.ctab
Loaded population stats
/usr/local/freesurfer/dev7/models/sclimbic.volstats.csv
nb_labels 14
Segmentation fault
i am using freesurfer-linux-centos7_x86_64-dev-20220802-56c77e1
Victor Zeng
Beth Israel Deaconess Medical Center
Keshavan Lab
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