External Email - Use Caution I fix it by adding --id 'segmentation id' to mri_segstats. Thanx Douglas.
Le mer. 10 août 2022 à 03:51, Douglas N. Greve <dgr...@mgh.harvard.edu> a écrit : > Can you send the terminal output and the petsuv.segstats.dat? How have you > verified that the registration is correct? What version of FS are you > running? > > On 8/5/2022 4:44 PM, Bouchra Guelib wrote: > > External Email - Use Caution > I want to segment registered PET to T1 MRI to 45 subcortical regions as > the regions in aseg.stats of MRI. > I used mri_segstats --seg MRI-floder/mri/aparc+aseg.mgz --reg > Pet2T1.register.dof12.lta --sum petsuv.segstats.dat --i PET-SPM.mgh > --ctab-default > into petsuv.segstats.dat, I found only 40 regions, not as aseg.stats > what should I change in my commend? > > -- > *GUELIB Bouchra: *Ph.D. student > *Lire *Laboratory > University: Constantine 2-Abdelhamid Mehri- *Algeria * > Alternative email: guelibbouc...@gmail.com > > > > > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1NpCGMMJPpx1SrP9Mm4GMZpmUsc3f6DVXMJuGRq4hTfjr9zcEfz4aXhu94CqxXyUxPnIvxZWTHHPno0MbhvKFfuiMu8FLURlI_o-4AiluthNuk36VZpdv2qxq2WE6XeAiwDhs0nDErgAMUN5q93BTkyamAO7Yhv_IqhGwtTtpinTiA_WOuLuORpVioelXYo5KZaUOumlfAQqsAnbDqKdUx0Ckbe4Q8xFaw3_4A_NsWsHg6uE266ASVFYkXpkEjyteJsWZCV59SUgxNFl16nMC1OkefE2jotpSROpbpBLJBBcmjtRhnCgl3k3T2K2iboKogn3LyHtwYzefnCdYeo7S4Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > The information in this e-mail is intended only for the person to whom it > is addressed. If you believe this e-mail was sent to you in error and the > e-mail contains patient information, please contact the Mass General > Brigham Compliance HelpLine at > https://secure-web.cisco.com/1ZGgVrpeh_Qht4f4_sV7mZDpHU6omx_ibDgTvUbQYCQf51WCToRjkIYQF0BD1YYIPb8SzDRgA1co_LvV963gSGba3QwYn6HWcYDEdZhdYCqaNsEPSJTb2DtNpm5jQ8vDKuIwb6M3mDZFKbgPHNngwHUV-nrwgL6R3ifW6ZMRYC_OeXzkMb7v3IPJH3yKrKqh-ZRKbFQSqTWReTnSxs88WgaDWCXsEShpgClwKZxdjZ-Zd5UdbidW2Si682iYuddZJWKR4pFC_E77VBcw5lmq9U76X_BB4rsfFdvvTRtfiOMWBRi-sBRj7K08I67ut4jLQYwf7RA61r0_p9Xeaw8FAHA/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline > < > https://secure-web.cisco.com/1ZGgVrpeh_Qht4f4_sV7mZDpHU6omx_ibDgTvUbQYCQf51WCToRjkIYQF0BD1YYIPb8SzDRgA1co_LvV963gSGba3QwYn6HWcYDEdZhdYCqaNsEPSJTb2DtNpm5jQ8vDKuIwb6M3mDZFKbgPHNngwHUV-nrwgL6R3ifW6ZMRYC_OeXzkMb7v3IPJH3yKrKqh-ZRKbFQSqTWReTnSxs88WgaDWCXsEShpgClwKZxdjZ-Zd5UdbidW2Si682iYuddZJWKR4pFC_E77VBcw5lmq9U76X_BB4rsfFdvvTRtfiOMWBRi-sBRj7K08I67ut4jLQYwf7RA61r0_p9Xeaw8FAHA/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> > . > Please note that this e-mail is not secure (encrypted). If you do not > wish to continue communication over unencrypted e-mail, please notify the > sender of this message immediately. Continuing to send or respond to > e-mail after receiving this message means you understand and accept this > risk and wish to continue to communicate over unencrypted e-mail. >
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