Just as a quick verification and follow up using
1. Specifying the number of components eg. if I want 5 -nuisreg the various components I want to regress out “-comp 6 – comp 7 comp 8 comp 9 2. Also just a follow up, how do I go ahead and run an ICA instead of the regular connectivity analysis From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve <dgr...@mgh.harvard.edu> Date: Tuesday, November 8, 2022 at 9:02 AM To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] acompcor in fsfast When you run fcseed-sess, specify -pca instead of -mean. When you run mkanaysis-sess, specify the number of components you want when specify -nuisreg On 10/26/2022 6:29 PM, Addison, Reuben wrote: Hi, I am running resting State functional connectivity and I want to run everything in freesurfer and fsfast. I wanted to know is it is possible to run acompcor in fsfast. If so, how do I go about it. Thanks. Get Outlook for iOS<https://aka.ms/o0ukef> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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