Hi Rachel Is RGB the correct type for the file? What kind of data do you expect it to be?
Cheers Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Rachel Wagner Sent: Wednesday, November 16, 2022 1:00 PM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Unsupported Datatype External Email - Use Caution I see, thank you! Do you know of a way I can convert it to a file type that is supported? Or what an alternative file type might be? Thank you again! Rachel From: Huang, Yujing<mailto:yhuan...@mgh.harvard.edu> Sent: November 16, 2022 10:29 AM To: Freesurfer support list<mailto:freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Unsupported Datatype Hi Rachel, It appears that your nifti has RGB datatype (128). Freesurfer doesn't support that yet. Best, Yujing From: Huang, Yujing Sent: Wednesday, November 16, 2022 7:54 AM To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu> Subject: RE: Unsupported Datatype Hi Rachel, Can you provide the version of Freesurfer that you are running? Thanks. Yujing From: freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu> <freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> On Behalf Of Rachel Wagner Sent: Tuesday, November 15, 2022 11:23 PM To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] Unsupported Datatype External Email - Use Caution Hello, I'm getting the following error, not sure how to resolve! developer@developer-VirtualBox:~$ mri_convert dicom-series-005-t2_swi_tra_p2_3mm_Mag.nii dicom-series-005-t2_swi_tra_p2_3mm_Mag.mgz mri_convert dicom-series-005-t2_swi_tra_p2_3mm_Mag.nii dicom-series-005-t2_swi_tra_p2_3mm_Mag.mgz reading from dicom-series-005-t2_swi_tra_p2_3mm_Mag.nii... niiRead(): NIFTI_UNITS_UNKNOWN, assuming mm error: No such file or directory error: niiRead(): unsupported datatype 128 (with scl_slope = 0) in /home/developer/dicom-series-005-t2_swi_tra_p2_3mm_Mag.nii Thanks! Rachel Wagner
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.