External Email - Use Caution Hello FreeSurfer Developers,
I would like to run samseg with the lesion module, hence samseg is asking to install Tensorflow using the following command: fspython -m pip install tensorflow==1.13.1 However, when execute the command, I get the following error: protobuf requires Python '>=3.7' but the running Python is 3.6.8 The problem persists when create a conda environment and try to install tensorflow there. I cannot seem to work around this problem, as fspython version seems to be 3.6.8. Why does FreeSurfer come with a Python version that conflicts with a protobuf version required to install tensorflow 1.13.1? Looking forward to your ideas/suggestions! Best regards, Joost de Jong Maastricht UMC+, The Netherlands FreeSurfer version: freesurfer-linux-centos7_x86_64-7.1.0-20200511-813297b Platform: CentOS Stream release 8 uname -a Linux radstation27.prd.corp 4.18.0-408.el8.x86_64 #1 SMP Mon Jul 18 17:42:52 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux ___________________________________________ Dr. Ir. Joost de Jong Senior Researcher Department of Radiology and Nuclear Medicine Visiting address: P. Debyelaan 25 | 6229 HX Maastricht Location: 4th floor, Room 4.H1.002 Postal address: Postbus 5800 | 6202 AZ Maastricht Maastricht UMC+ is a commercial name of azM, Chamber of Commerce no.:14124959 E e-mail address: j.dej...@mumc.nl | T +31 (0)43 38 74871 I http://secure-web.cisco.com/1TpM-pyj3jiJroVpfVeteQX14SCBG38j6yjGHU417S98I6EEXER6KIbmqMdcMlsAtLUVeEBe0TAR424dY-gLVjFSUjWI20f_iqn6M223cgMnSqLYPBapq9_S-gX2dj3uBNRvbGjmICl5-wOLfmn4IqayyRjsXG4WHV3rxptXfzHree_JKi6LQQF8L2hKe9Vgc4c46oCNWvHqGNnpPcjQ3T91-CDF0FUDpsQil_eV9GOWlDc8GlwDNj8QwcwVRRcIrUwvR3i-CGnlTpIX0jdjNwAd_Dl2RkEizDPzEwlgE6-dGdYYCie0u-Mr-SEpO1lUy/http%3A%2F%2Fwww.mumc.nl<http://secure-web.cisco.com/1QKGqMChi0EuhQOKcM2h6MgZEowPxfNXfjZnF63KheUmVyX4qCrMWHMxplN1_xohHoeUfYJRW1lhHmIwHLhV-21NYx3cu2XDA_GzR33msNTXfsuK4u6jX60KAOnHOge9pKy3ohvdVoZa8BXGtHCCvuAdVdk2Z_chn7WiLm2ngsWV1Q4Ji3bcBTwqbIhfSA1CMURhA9NoSmsb6pftgJFprIObbt87eRVEM4O7ingEECe9SHB16glTrU_rr4rwDA8h2FmpsYS11KpdjE11ESSg161x7CgSuuZZwS0bH7C01BGBdVL88v0BZKS-dsbhABhCV/http%3A%2F%2Fwww.mumc.nl%2F> | http://secure-web.cisco.com/1OWWDYyMq9U6pHTPuxlmvarkGZroDverVyUC-msNiVy-hy6LIwVoRJEa8B5v68ZpMz3E4gwXV60XB3Goe7wk_X3nvruDX5L_4_BLg7mocFVvXW-pjl50Z9TaBp1Q4GupQvwgLXyWjU9N9M4KYnJfyKM-aMFiRn2NX_M_p56GR4EekBsLUPpko4DE7oEtwM3ba4S-3cpm1LzwaRbCfJn-fU_SdRQ_XmrFljLCcNxL4Ugk6DyBI7BDVv7osUVlv4-hpfvi-qtSDx77yPUbBrapoYknlLkADNHB5aVvnAxXQsmo7lkLG5zT3M9KAsK0_qHPY/http%3A%2F%2Fwww.gezondidee.mumc.nl<http://secure-web.cisco.com/1M1zOL-XvgT6vJF2ypQQAMXmM6wb82kiy6zYURLqTj3GpadE-aMFeR9HgwqRFzo5htjUgI5K7qLhkditwhrLGAq8WyHgYfJHwoNmuRDEz5eXYF85BkqmOhc2RG0MT16mtl7rrgrBVKScHRwgB5c8dbMRLdGlm9eZRXSs3na2RLeHkoH-dYobN-m-G5lH6olcbefyG2v-YGaJJJynMMyOw3bz-S5b4F12SaXJA5QYPFptFAaX0-ZFqJ-akmQKG476Ylohu1UU3sqFO7lIVrvErY4hxgOnNpytLdECM4rhbGd2Anu9Z2jR0MMq3T4Ofgslf/http%3A%2F%2Fwww.gezondidee.mumc.nl%2F> Follow us on Twitter<https://secure-web.cisco.com/1_xhiCTMlQOowUfDjYP14RRMxfPgUPnZOckHkdvvZtSD3ljs5P9gFTrqINI69DMNkRUMuXepHMwKWhbZbC68oVDK612qLbOF6Lm3cUM8DEbv4bHTau5kvHqJtxR00bbQzTItL3vW4aI2NpAqNWBV5R0o7D5svDxOet9xiOLogXcz8h2_sT5YL1Be1Rcj88xK67RLAjNyMmPDCNUI2G90Ix8AIcoz7zdgouvknePTus7BVAaNdigvqRZBbrP8QF-WGAnrsgTN5-LstZ7XhbFrueYywYf87fJRM2URa2_zF448yC1Xb6A09xap8pnVfOnmUnCn0OgNcrT8eK5eIO2PVkw/https%3A%2F%2Ftwitter.com%2FMaastrichtUMC>, Facebook<https://secure-web.cisco.com/1iZHQnMegyxXeanDho81aAKRFgmFeaf4vvT2rMQKdMjvARdTIXHZkH3ir4y7qNytCWafeA4kLZo4AVe5gySTy49mj4MKACWOMn3yM8qp8nQ57mdj9JtHdIyRiqktqrAQRguTFQl2iwLIKF9CuOquPlr4Cr3aBdg3Y03E3MDtdazvsKb2VmCmQcYkw_0sk8HEYdC9u1Abemf0-H2Gyt5wIxMz67bZTbACGsyjxKe6FFli9RxUv61dZ96irxnZfHaTDp6Y1m93Gofr09jctd5znZ2xmXv6vqxmYQ8bUWH08HvYR2qnKJKv7uAgqM54zqQWbDq1th0FBUYjN19DmRC3ggg/https%3A%2F%2Fnl-nl.facebook.com%2Fmaastrichtumc> and LinkedIn<http://secure-web.cisco.com/1YweY1DY29HflopcYocSi02MCLHl2sA6mPcIrSXx-EbYH1pRvl-deGn9QrkUX3yV8qquYpKNsw8mkdtxCJV_Gs1LXgoRFZYyLw8WzxbHKr6RwJdiNGD_yYboCoVxHoHfKxG1yWi_E_Xc8UAe6aP4J2pRX3zeqfxBIWicHMXBqeTEKSQKhkC4NqiDcPSfN24Rt-oEbP8n8Rdhg8hfcxEl9-pIIz9BzL40XyKUQ94DIEzZzgQHbwDQQYo7JO1OMMpis5TGYFXdXBcrCpqhxL4rxRw0JlKk762Xvn8xkN4zhRxU6r778wIFpOtW_ZnlCI2wxtnRyHZdC8_hg8cEeEqb5cA/http%3A%2F%2Fwww.linkedin.com%2Fcompany%2Fazm> ________________________________ This email and any attachments may contain confidential or privileged information and is intended for the addressee only. If you are not the intended recipient, please immediately notify us by email or telephone and delete the original email and attachments without using, disseminating or reproducing its contents to anyone other than the intended recipient. The Maastricht UMC+ shall not be liable for the incorrect or incomplete transmission of this email or any attachments, nor for unauthorized use by its employees. ________________________________
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.