You can map the curvature from fsaverage to the individual (or reverse)
and then load both on the surface to see if they agree. I think that CVS
will/can save intermediate registrations, so you might check those to
see if the problem is cropping up at a particular step.
On 11/9/2023 8:18 AM, Antonín Škoch wrote:
External Email - Use Caution
Dear Doug,
thanks for the response.
Talairach registration seems OK.
I am not sure, how to check surface-based registration.
I have tried to look at subject's ?h.sphere.reg (with ?h.curv loaded)
and ?h.sphere of fsaverage overlaid. But I am not sure if it is a
correct way to do it: the spheres even do not spatially coincide
(screenshot).
Regards,
Antonin
I'm not sure what happened. Have you checked the surface-based
registration? Also check the talairach reg.
On 10/19/2023 11:35 AM, Anton?n ?koch wrote:
>
> ????????External Email - Use Caution
>
> Dear experts,
>
> I have encountered an failure of
>
> mri_cvs_register --mov my_subject --mni
>
> The resulting output file
>
> final_CVSmorphed_tocvs_avg35_inMNI152_norm.mgz
>
> looks like in the attachment.
>
> Could you please give me a hint, where could be a problem, or
how to
> troubleshoot the mri_cvs_register routine?
>
> Regards,
>
> Antonin Skoch
>
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