External Email - Use Caution Dear R,
Thank you for the information. The deb package is useful so I agree with you. Only one point is that using deb cannot handle installing two different versions. Do you have any recommendation managing two (or more) different versions using deb package? Best regards, Kiyotaka On Sat, Dec 30, 2023 at 1:21 PM fsbuild <fsbu...@contbay.com> wrote: > External Email - Use Caution > > > Depending upon the state of a machine, there is no guarantee a list of > "required" packages will encompass everything that needs to be > installed/updated, or that a manual install will work. So we neither > recommend or support manual/piecemal installs, e.g., via the list below, > instead of using the built-in linux package management tools. > > - R. > > On Dec 29, 2023, at 22:32, Kiyotaka Nemoto <kiyot...@nemotos.net> wrote: > > External Email - Use Caution > > Dear Akira, > > I agree with R that installing FreeSurfer using the deb is preferred, but > if you want to stick to tar.gz, > below is the list of the packages to be installed when you install > FreeSurfer using the deb package. > So if you install these packages, you would be able to run freeview. > > Hope this helps, > > Kiyotaka > > sudo apt install -y language-pack-en binutils libx11-dev gettext x11-apps \ > perl make csh tcsh bash file bc gzip tar \ > xorg xorg-dev xserver-xorg-video-intel libncurses5 libbsd0 libc6 libc6 \ > libcom-err2 libcrypt1 libdrm2 libegl1 libexpat1 libffi7 libfontconfig1 \ > libfreetype6 libgcc-s1 libgl1 libglib2.0-0 libglu1-mesa libglvnd0 > libglx0 \ > libgomp1 libgssapi-krb5-2 libice6 libjpeg62 libk5crypto3 libkeyutils1 \ > libkrb5-3 libkrb5support0 libpcre3 libpng16-16 libquadmath0 libsm6 \ > libstdc++6 libuuid1 libwayland-client0 libwayland-cursor0 libx11-6 \ > libx11-xcb1 libxau6 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 \ > libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 \ > libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 \ > libxcb-xinput0 libxcb-xkb1 libxcb1 libxdmcp6 libxext6 libxft2 libxi6 \ > libxkbcommon-x11-0 libxkbcommon0 libxmu6 libxrender1 libxss1 libxt6 > zlib1g > > On Fri, Dec 29, 2023 at 12:14 PM fsbuild <fsbu...@contbay.com> wrote: > >> External Email - Use Caution >> >> >> That message could be the result of missing system libraries which the >> Ubuntu 22 FS 7.4.1 .deb package will try to automatically identify, >> download and install for you. You can download the package via the link >> *MailScanner >> has detected a possible fraud attempt from "secure-web.cisco.com" claiming >> to be* >> https://secure-web.cisco.com/1J9_Z0HLKDYWwXrGPXi_fqFTQLygJlwVaU-141E5zzDhAkkw1xXapN0nnVgWhTS6XGCgfkc5ueirEA_jvddWCTdYAfUcAH7SxCSaFAzawZC4lvbC8y_9NKqsjhD5ZFMrWt7X3muEEOwu9TlGI9rdd8dbC5nuG2Ghq2KLE70SI4ZxUWWmXSVkXCZyhhXZq5f4wFQyAvLrAHPX0lR7gws9mQ_Q3UYrjc-3musq7AJqT7K0xWCpNBXEO5jRyNhN_5IQyFWAx8la8y0nyTkV52oB8n6sf4nY9sqgm_KaTMe8Mr5-hIcABk8sdULBQpIZmVLKy5JEVPha5YlG51rCIN7H38g/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F7.4.1%2Ffreesurfer_ubuntu22-7.4.1_amd64.deb >> <https://secure-web.cisco.com/1_U_QdXreVu6wH-joAQGYWXyzydRY-oOu_HN35KN1_Gu2EugYsBfddLu9kSjKPPIOY85f8qSjXQxvlcdHQbCEYXVWo8anAkh0AdrTtlKCaQwtww17b3P86ROK0bEpuAFeszer1A1_0OHLRUTv_M-z4R-ioKJRfHKPvCW5AMEWOI0Fz18EeZs4-TM2OkaB6BIbQtC-tkRho8ufs5oTdQLGRd5tRFsTg3W9EsFp7A1jq97JFX4N8qxa_rjgULLaBn6vZ_vO2UeqbtQSS8yEfOh13X15865cyTH35_evnYvZCQasPJPE6AdHq2BCC-D-CsYDTDeIQfKtRuffhcyHx5vFdA/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F7.4.1%2Ffreesurfer_ubuntu22-7.4.1_amd64.deb> >> and >> the install can be done with, >> >> … cd to your Downloads to wherever the .deb file is … >> >> $ sudo apt install ./freesurfer_ubuntu22-7.4.1_amd64.deb >> >> If the install succeeds, freesurfer will be under >> /usr/local/freesurfer/7.4.1 which is the path to use for the environment >> variable FREESURFER_HOME, >> >> $ export FREESURFER_HOME=/usr/local/freesurfer/7.4.1 >> >> If they are not already set in your environment, you should also set, >> >> $ export XDG_RUNTIME_DIR=$HOME/.xdg >> >> $ export DISPLAY=:0 >> >> - R. >> >> On Dec 27, 2023, at 23:17, Akira Kita <jorrydep9...@gmail.com> wrote: >> >> External Email - Use Caution >> >> I have installed FreeSurfer 7.4.1 on Ubuntu 22.04 using the binary tar >> archive freesurfer-linux-ubuntu22_amd64-7.4.1.tar.gz. >> >> Freeview fails to launch with the following error message: >> >> This application failed to start because no Qt platform plugin could be >> initialized. Reinstalling the application may fix this problem. >> Available platform plugins are: eglfs, linuxfb, minimal, minimalegl, >> offscreen, >> vnc, wayland-egl, wayland, webgl, >> >> How can I solve this? >> >> >> Akira >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> *MailScanner has detected a possible fraud attempt from >> "secure-web.cisco.com" claiming to be* >> https://secure-web.cisco.com/1V_JnslOQ1vJ4stqYuv4hRFLUz7dZhLqSV_wd3v0YC26FlnRVi8uXr40DxDWjqlLKXteH8zTqowAGGvUbhj_SyuZ6XijqfNgCU5v2u27nIBtVhbC_Bbk57KCDxqO00h7VpO_Gh3G1g_9Ui5U6kEUuorchqXTDtjrtD0dFICe9GEaYPoddAXL3MdanMUpoL6J3y3YvdQZrSHMp8gVQGSTcoHIkNnTXnvRyvbU1t3CV6_6y3M0MxIJLFfgS9p-ZIHJ9kiHpJ5an88DpKk3bSjsiNQlZAXM2AajtHWlqcZek47qcFWMJJ0uko2DvntzwiaqUhJ_YBTSQatPaKIcv5at-7Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer >> <https://secure-web.cisco.com/1QI73ha0dZUxEGvYoEY_1bYLyCUQHOXV-uF3VAAGaEPKSzyD1nk2DxAarPrXJTqvTusR8gBzTyWOW2-kKzsxSeIadM-y30LBoFcSz5mxwl6BrxdQ6Inv507a1TZr765rV_NZR-bk698jbJ-vqcPvC4EKJ5UTWDndvRP0uBpApG-TtOsQUPPG8ZHqP6nuQ0_aya37i0g22_g_ZxtO8xo3uJ7k-zPCumS_Eh5wFjz0kMaNw8xK2i_tLxfm9uND_vZiF4BA8RBWhfWCKe3bjJxORg6txWtP7nqolZUOmiK8132YcfTy76x54nkehXXP1lKggt5vEVxPG3qW4ilDrAduriw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu <freesur...@nmr.mgh.harvard..edu> >> *MailScanner has detected a possible fraud attempt from >> "secure-web.cisco.com" claiming to be* >> https://secure-web.cisco.com/1_Y_hq1CDGcN6hCufmh_XaBwvNXWCE2fQWEDynV8-4XJei9iefCfPmOb02n_0OPIXHt2TV_nJFTzhbwjV3a-Uj92Z1dAX8UxwM4hkeJ1OE-bLdaK9UKTUUHlPuJYffWruB0R4klWJAMu-070Fn2f0MSeGEIoR00R_iu7Iex0irK7TPqArbecexwt-CF_AUQJNoW9BHowXGMkbxroVG6Y3RURfqLS3Q7GNnoNS_ur0JnDTxcuYtxq0ex78uZFYLVPxFZpegCoH9EcKmYjDZ_U92qCUZwVWJ6ybs777YxNhy2-SoF2qoF1mLS_pH-UiuLde-uPlpyS7wiIE1l5fJfSpWg/https%3A%2F%2Fmail..nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer >> <https://secure-web.cisco.com/1QI73ha0dZUxEGvYoEY_1bYLyCUQHOXV-uF3VAAGaEPKSzyD1nk2DxAarPrXJTqvTusR8gBzTyWOW2-kKzsxSeIadM-y30LBoFcSz5mxwl6BrxdQ6Inv507a1TZr765rV_NZR-bk698jbJ-vqcPvC4EKJ5UTWDndvRP0uBpApG-TtOsQUPPG8ZHqP6nuQ0_aya37i0g22_g_ZxtO8xo3uJ7k-zPCumS_Eh5wFjz0kMaNw8xK2i_tLxfm9uND_vZiF4BA8RBWhfWCKe3bjJxORg6txWtP7nqolZUOmiK8132YcfTy76x54nkehXXP1lKggt5vEVxPG3qW4ilDrAduriw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> > > > > -- > Kiyotaka Nemoto, M.D., Ph.D. > Associate Professor > Department of Psychiatry > Division of Clinical Medicine, Institute of Medicine > University of Tsukuba > 1-1-1 Tennodai Tsukuba, Ibaraki 305-8575, Japan > E-mail: kiyot...@nemotos.net > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <freesur...@nmr..mgh.harvard.edu> > *MailScanner has detected a possible fraud attempt from > "secure-web.cisco.com" claiming to be* > https://secure-web.cisco.com/1V_JnslOQ1vJ4stqYuv4hRFLUz7dZhLqSV_wd3v0YC26FlnRVi8uXr40DxDWjqlLKXteH8zTqowAGGvUbhj_SyuZ6XijqfNgCU5v2u27nIBtVhbC_Bbk57KCDxqO00h7VpO_Gh3G1g_9Ui5U6kEUuorchqXTDtjrtD0dFICe9GEaYPoddAXL3MdanMUpoL6J3y3YvdQZrSHMp8gVQGSTcoHIkNnTXnvRyvbU1t3CV6_6y3M0MxIJLFfgS9p-ZIHJ9kiHpJ5an88DpKk3bSjsiNQlZAXM2AajtHWlqcZek47qcFWMJJ0uko2DvntzwiaqUhJ_YBTSQatPaKIcv5at-7Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > <https://secure-web.cisco.com/10yQktVCUjWLcX4EnUarLK9yyInP-qwPbHkUVrTZrFycxGyPVVNCS6AWceA4VrXaqDZKNKgT8IWIqxcI0mDQuwYlQezYTxAnnONO71KZ09FcHlwebj6YV0IDI5xoA5p78gksfhNm09jo1dvgFYl1FvieWayGcWE22K2ERcg8bpu1w6FtLf6vCfZDTIidn8kB3nXHRUjZ9zMeCJhe4qU2-FRuOjQTrx_wM1kUwjkciM7ayEqWB7S7ZAhruRV-KxIIWDSWimEi8yd4CTQgUXqTWvY3y4WIRLQmyeJBIty_V8dH4Hs-U2PmdjIv1c00zo8h47KHdfo-wP2R20PXHcKtkmg/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1V_JnslOQ1vJ4stqYuv4hRFLUz7dZhLqSV_wd3v0YC26FlnRVi8uXr40DxDWjqlLKXteH8zTqowAGGvUbhj_SyuZ6XijqfNgCU5v2u27nIBtVhbC_Bbk57KCDxqO00h7VpO_Gh3G1g_9Ui5U6kEUuorchqXTDtjrtD0dFICe9GEaYPoddAXL3MdanMUpoL6J3y3YvdQZrSHMp8gVQGSTcoHIkNnTXnvRyvbU1t3CV6_6y3M0MxIJLFfgS9p-ZIHJ9kiHpJ5an88DpKk3bSjsiNQlZAXM2AajtHWlqcZek47qcFWMJJ0uko2DvntzwiaqUhJ_YBTSQatPaKIcv5at-7Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer -- Kiyotaka Nemoto, M.D., Ph.D. Associate Professor Department of Psychiatry Division of Clinical Medicine, Institute of Medicine University of Tsukuba 1-1-1 Tennodai Tsukuba, Ibaraki 305-8575, Japan E-mail: kiyot...@nemotos.net
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
