External Email - Use Caution Sorry, to be clear, there is a measurement for bilateral mean thickness offered by default? I'm able to gather the left mean thickness and the right mean thickness easily.
Victor Zeng Beth Israel Deaconess Medical Center Keshavan Lab -- ________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve <dgr...@mgh.harvard.edu> Sent: Friday, January 12, 2024 4:26 PM To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu> Subject: [External] Re: [Freesurfer] extracting measurements for mean gray matter thickness/LGI I don't understand. Why not use the mean thickness from FS? We have an lGI module; we have not supported it in years, but maybe it still works. https://secure-web.cisco.com/1VsAamFIiyrHgC1fHpczhX9TaRNFmufCHxQtn-XOhmuyE9a3JzAxGIz-At0uYnBuvfcG72Job7Isg-NoUDQiTUK7HnlLZJG9ZN-je9SvWQQQH41Jei17EHcJkpWzSGVtb0ymhAORUoTEn11d_HOgK1t07nmoMF0wVvboiTMq_QdmkJ4luGL_KBtojoesZjIkUyD7v2ST_hor0q_L0LVkhIh3fytnvq_1GRHPM4c-xng5AwkBQLGH3u9EE0OiXUkoACoQrztbj3oC56Xk3qWb7CBfLBQaOt0sKwCwI7RJ_OGTwKNyDF89OKqGd-GBZUIE7sU0GAS5SadbgiIEQPkU0cg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FLGI<https://secure-web.cisco.com/1sxZdHRGwQixpslNnDM7fe2nxFhipz0Goo4mimu1bQczyNIHC3zjIqirioO3eIfDXyvc_IZcJnQE-h_AARBy6mekaEqIRXmLbkbAO_Us_gyJmqHLXWBAe0SrbY8tP9szKKwGsO_gnkoV4h2oCqpgtYrdViip6acH-LP0XjmtYTwWpoxJS8yBnkP2aqMMbmkpy30lk1g1e6IE3499A6pCetj9-1ZLy4sx1Ra2S-WSr-PCmFpfDqZuzVJa1-UwFABhI1xZZmv-haKg9G-wR9wyOb75unRTkOLmt6TdQaQOuwNtXEYTplcji1G5_OxnR7lzApwg6p1TnoWwCm1hdhkjdzw/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FLGI__;!!AIv8Mrc!_zif_gc_qZJfmYGB6AxETsBfWkprrxnEsOgn6g4g5ZPo3QFoRz3wFE7cSQOEj1n7YVvl0KehPmd93THbISFFiVaZ1L-Y$> On 1/10/2024 9:52 AM, Zeng, Victor (BIDMC - Keshavan - Psychiatry) wrote: External Email - Use Caution Hi, We were wondering what the preferred command is for extracting mean gray matter thickness/LGI I am aware that FS outputs left/right mean thickness but wanted to be conscious of the fact that left/right hemisphere might have different sizes. Victor Zeng Beth Israel Deaconess Medical Center Keshavan Lab -- ________________________________ PLEASE NOTE: This message is intended for the use of the person to whom it is addressed. It may contain information that is privileged, confidential and exempt from disclosure under applicable law. If you are not the intended recipient, your use of this message for any purpose is strictly prohibited. If you have received this communication in error, please delete the message and notify the sender so that we may correct our records. See our web page at http://secure-web.cisco.com/1jmLi8sFSetwkt-sXvW1VfGNexwEQW5TyAhKXMPUi6BiH2WwC57OhfGzXPg_QuQ9xYOK_cs9bZ3Kvyu3lh8GMcZxgU9m4msBg1GUrTQMlf_MKeA3ORgYEgEvghGOaVAtOPlbmNRwaA3Ztodm_waB__auOxT8z2_J4SdvnEBRXv6crZZFAwWje2TzPaE6NTZnmFnzjOgbFLPbshonV76-5MA8zU2PNWehXcEj9aS0TjttiF8RAJQzUXeCDvdcNYAWjW5OGQO5VFEGNrkLVZP8wZGQ3Iw1p4Fm9hpvPTThxULNc38UeoV1II5Nhx-Z0dUv18Wv-FVqBDcppkuHMpPNzIQ/http%3A%2F%2Fwww.bilh.org for a full directory of Beth Israel Lahey Health sites, staff, services and career opportunities. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://secure-web.cisco.com/1Im1xhFZIA5oSjc399TLHZJHAeXGgcA_cGjEMaMQ5BUDTn6LvMUrcN7pdVwgrdzCe5T5vquK0Me6afxdDDf-_79M3U8Y3kjDfRz8-ONhOFUjQ-VNEpL4IjTPa3S21_643WJRZNgON4Em7_LpORKE8LbnfFwW1-kfVV1hkmL5k1cLA_7Ms5w5TO1kKs-DWVhmG9HEkokMtEDPT7u9ZsHel3O0gp6kJbuV8Nj7LGEmWCiVGOkULezBELazibVCk930xnSr9y7vVkpHvhvoBOAyqtWV_VPoXlr73_zanlzSyRpCJxFd0p9Fm9YPHUFotYiHW4cAWw3UfeSJt0kmEiJFGsA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer<https://secure-web.cisco.com/1rV32kbO0pcyKIXAnXmMMgI7h4NLmic0_SXdOuf-s7sob8IiewmsQNG3-4MzrfVe9XMnZVonGBlkHCgDaJQ3UdWoNIhalPvJAQ_fT0WBnTGoOQS7_ghyeQ2T3t4lSJgeYFjyEqpfp5UN-Z37kSdAzBJ-r4NUvEV1xx29fH8hO24UfIgZjeGirkWTWldvim0FKhkvi05KF3wLCOjDsKO6bTz2yLtOtQqkbOvJBzeu0SAAE84Jck5pGCCx1Cs-7kg6kfLR4nWhXiJWZK9juR2Lsb9MCuoe3A945sS4ZadCkgvtwijN4RYRWFT51imFPXVZCvytGIgMIIz7MvztL-DKgkw/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer__;!!AIv8Mrc!_zif_gc_qZJfmYGB6AxETsBfWkprrxnEsOgn6g4g5ZPo3QFoRz3wFE7cSQOEj1n7YVvl0KehPmd93THbISFFiTy1yYOy$>
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