Can you run it with -debug as the first option, capture the output, and send it to me? It will be a lot of output, so just capture it in a file and send the file, eg
preproc-sess -debug -s subj -surface fsaverage lhrh -fwhm 0 -nomc -mni305 -fsd rest -per-run -sliceorder up -force | tee pps.log On 1/22/2024 11:20 AM, Stefano Delli Pizzi wrote: > External Email - Use Caution > > Hello FreeSurfer Developers, > > I'm attempting to run preproc-sess with -nomc option > > preproc-sess -s subj -surface fsaverage lhrh -fwhm 0 -nomc -mni305 -fsd rest > -per-run -sliceorder up -force > if: Expression Syntax. > > This error occurred before to create the file with slice timing correction > > The error did not occur when I run the preproc-sess command line without the > -nomc option. > > I've searched the list and no similar errors have been reported. Does anyone > have any thoughts on how to trouble-shoot this one? > > FreeSurfer version: freesurfer-macOS-darwin_x86_64-7.4.1-20230614-7eb8460 > Platform: Darwin Kernel Version 21.6.0 > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
