External Email - Use Caution Dear FreeSurfer experts
I tried to segment my brain MRI using NextBrain.in the most recent FreeSurfer-dev package. I followed the command in https://secure-web.cisco.com/150f92dNZNQHVJBK1fmC5Z4FYOqCYvgP1aIrq7dafQUxfyrR4wSHgPGLPwf0jxqrEBJqs-9YISyUo_u7_Onm0V3w4yaWygtLcx1JF4i9WiTS5ZTKPYLpQ9-Uldh3wQBbbZnRbsvvb1KbOyJKF22HkqyG58bxFrVQFGJXDy_a4M7FZc0gRtGZpqDcgI6QO9YXZPxhk3WjEmkZSigkBreI_rFTBD5mwSU5vIedOcNAPpUHyOikwtFDi3Kw5s7y7Mqm9IfFqXmCnJ9xzSxY-6naJGV0bla9PAJdSX4xLSPaNx8eeO2_FIgx2gjXODXa6uhZ-E0YDfbNW-KE64Udylt4MWQ/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FHistoAtlasSegmentation, but, I got only the volumes of 101 labels How can I got the 333 labels and volumes using NextBrain? my command as follows mri_histo_atlas_segment ../subject/mri/orig.mgz ..subject/mri/histo_atlas_segmentation/ full 1 -1 Best regards Woo-Suk Tae Seoul, Korea -------------------------------------------------------------------- Woo-Suk, Tae Ph.D. Research Professor Brain Convergence Research Center, Korea University College of Medicine, Seoul, Korea mobile: 82-10-9120-4629 office: 82-2-920-6077 email: woosuk....@gmail.com, w <woosuk....@kumc.or.kr>s...@korea.ac.kr woos...@naver.com --------------------------------------------------------------------
subject,total intracranial,left cerebral white matter,left cerebral cortex,left lateral ventricle,left inferior lateral ventricle,left cerebellum white matter,left cerebellum cortex,left thalamus,left caudate,left putamen,left pallidum,3rd ventricle,4th ventricle,brain-stem,left hippocampus,left amygdala,csf,left accumbens area,left ventral DC,right cerebral white matter,right cerebral cortex,right lateral ventricle,right inferior lateral ventricle,right cerebellum white matter,right cerebellum cortex,right thalamus,right caudate,right putamen,right pallidum,right hippocampus,right amygdala,right accumbens area,right ventral DC,ctx-lh-bankssts,ctx-lh-caudalanteriorcingulate,ctx-lh-caudalmiddlefrontal,ctx-lh-cuneus,ctx-lh-entorhinal,ctx-lh-fusiform,ctx-lh-inferiorparietal,ctx-lh-inferiortemporal,ctx-lh-isthmuscingulate,ctx-lh-lateraloccipital,ctx-lh-lateralorbitofrontal,ctx-lh-lingual,ctx-lh-medialorbitofrontal,ctx-lh-middletemporal,ctx-lh-parahippocampal,ctx-lh-paracentral,ctx-lh-parsopercularis,ctx-lh-parsorbitalis,ctx-lh-parstriangularis,ctx-lh-pericalcarine,ctx-lh-postcentral,ctx-lh-posteriorcingulate,ctx-lh-precentral,ctx-lh-precuneus,ctx-lh-rostralanteriorcingulate,ctx-lh-rostralmiddlefrontal,ctx-lh-superiorfrontal,ctx-lh-superiorparietal,ctx-lh-superiortemporal,ctx-lh-supramarginal,ctx-lh-frontalpole,ctx-lh-temporalpole,ctx-lh-transversetemporal,ctx-lh-insula,ctx-rh-bankssts,ctx-rh-caudalanteriorcingulate,ctx-rh-caudalmiddlefrontal,ctx-rh-cuneus,ctx-rh-entorhinal,ctx-rh-fusiform,ctx-rh-inferiorparietal,ctx-rh-inferiortemporal,ctx-rh-isthmuscingulate,ctx-rh-lateraloccipital,ctx-rh-lateralorbitofrontal,ctx-rh-lingual,ctx-rh-medialorbitofrontal,ctx-rh-middletemporal,ctx-rh-parahippocampal,ctx-rh-paracentral,ctx-rh-parsopercularis,ctx-rh-parsorbitalis,ctx-rh-parstriangularis,ctx-rh-pericalcarine,ctx-rh-postcentral,ctx-rh-posteriorcingulate,ctx-rh-precentral,ctx-rh-precuneus,ctx-rh-rostralanteriorcingulate,ctx-rh-rostralmiddlefrontal,ctx-rh-superiorfrontal,ctx-rh-superiorparietal,ctx-rh-superiortemporal,ctx-rh-supramarginal,ctx-rh-frontalpole,ctx-rh-temporalpole,ctx-rh-transversetemporal,ctx-rh-insula orig.mgz,1419376.0,220960.44,245143.2,10524.024,587.158,15226.364,52580.062,6486.725,3172.058,4943.819,997.611,1138.142,1562.307,22484.832,3706.669,1661.134,261044.23,728.837,3948.052,214498.89,245845.8,9837.828,718.207,13765.447,51108.062,6712.08,3496.43,5091.322,1375.864,3605.934,1659.212,752.937,4012.216,3250.569,3550.659,7069.224,5283.201,5283.12,11321.66,9482.133,9294.902,2968.696,12740.552,7399.551,9934.023,5933.83,10030.493,3143.083,3958.854,4723.826,2698.144,3607.302,4775.2,8966.294,7736.732,11202.881,8488.257,2193.497,11974.645,18276.135,11847.277,9773.046,10573.724,3902.399,5289.5,2280.618,6189.164,2676.067,4380.078,5957.62,4729.964,4715.353,12645.911,13072.519,11313.838,4713.169,11478.066,6345.908,9426.335,5379.622,8431.767,4249.72,4183.77,4015.33,4713.499,5082.48,3224.371,8941.531,4713.256,11673.148,9511.726,2455.12,11325.822,17844.521,13702.588,8688.552,9427.185,3657.71,3965.856,2597.757,6605.644
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