Ted,

I'm confused.  Why would a genetic algorithm ever select a hen that produces
fewer eggs over a hen that produces more eggs?


Shawn

On Fri, Jul 9, 2010 at 2:57 PM, Ted Carmichael <teds...@gmail.com> wrote:

> Nick, this is perfect.  Thank you!
>
> BTW - the reason for this request is, my advisor and I were asked to write
> a chapter on Complex Adaptive Systems, for a cognitive science textbook.  In
> it, I talk briefly about GA, and put this story about the chickens in
> because I thought it was a neat example.
>
> I'll add the references now.  Much appreciated.
>
> -t
>
> On Fri, Jul 9, 2010 at 12:28 PM, Nicholas Thompson <
> nickthomp...@earthlink.net> wrote:
>
>>  Ted,
>>
>> Ok.  So, if I am correct,  this was an actual EXPERIMENT done by two
>> researchers at Indiana University, I think.  As  I "tell" the "story", it
>> was the practice to use individual selection to identify the most productive
>> chickens, but the egg production method involved crates of nine chickens.
>> The individual selection method inadvertently selected for the most
>> aggressive chickens, so that once you threw them together in crates of nine,
>> it would be like asking nine prom queens to work together in a tug of war.
>> The chickens had to be debeaked or they would kill each other.  So, the
>> researchers started selection for the best producing CRATES of chickens.
>> Aggression went down, mortality went down, crate production went up, and
>> debeaking became unnecessary.
>>
>> The experiment is described in Sober and Wilson's UNTO OTHERS or Wilson's
>> EVOLUTION FOR EVERYBODY,  which are  safely tucked away in my book case 2000
>> miles away in Santa Fe.   Fortunately, it is also described in
>>
>> Dave Wilson's blog
>> http://www.huffingtonpost.com/david-sloan-wilson/truth-and-reconciliation_b_266316.html
>>
>> Here is the original reference:
>>
>> GROUP SELECTION FOR ADAPTATION TO MULTIPLE-HEN CAGES : SELECTION PROGRAM
>> AND DIRECT RESPONSES
>> Auteur(s) / Author(s)
>> MUIR W. 
>> M.<http://www.refdoc.fr/?traduire=en&FormRechercher=submit&FormRechercher_Txt_Recherche_name_attr=auteursNom:%20%28MUIR%29>;
>> Revue / Journal Title
>> Poultry 
>> science<http://www.refdoc.fr/?traduire=en&FormRechercher=submit&FormRechercher_Txt_Recherche_name_attr=listeTitreSerie:%20%28Poultry%20science%29>
>> *ISSN*  
>> 0032-5791<http://www.refdoc.fr/?traduire=en&FormRechercher=submit&FormRechercher_Txt_Recherche_name_attr=identifiantsDoc:%20%280032-5791%29>
>>  *CODEN* POSCAL
>> Source / Source
>> 1996, vol. 75, no4, pp. 447-458 [12 page(s) (article)]
>>
>> If you Google "group selection in chickens," you will find lots of other
>> interesting stuff.
>>
>>
>> Let me know if this helps and what you think.
>>
>> N
>>
>> Nicholas S. Thompson
>>  Emeritus Professor of Psychology and Ethology,
>> Clark University (nthomp...@clarku.edu)
>> http://home.earthlink.net/~nickthompson/naturaldesigns/<http://home.earthlink.net/%7Enickthompson/naturaldesigns/>
>> http://www.cusf.org [City University of Santa Fe]
>>
>>
>>
>>
>>
>> ----- Original Message -----
>> *From:* Ted Carmichael <teds...@gmail.com>
>> *To: *The Friday Morning Applied Complexity Coffee Group<friam@redfish.com>
>> *Sent:* 7/9/2010 5:34:29 AM
>> *Subject:* [FRIAM] Real-world genetic algorithm example... help!
>>
>> Dear all,
>>
>> I'm trying to find reference to a story I read some time ago (a few years,
>> perhaps?), and I'm hoping that either: a) I heard it from someone on this
>> list, or b) someone on this list heard it, too.
>>
>> Anyway, it was a really cool example of a real-world genetic algorithm,
>> having to do with chickens.  Traditionally, the best egg-producing chickens
>> were allowed to produce the offspring for future generations.  However,
>> these new chickens rarely lived up to their potential.  It was thought that
>> maybe there were unknown things going on in the *clusters *of chickens,
>> which represent the actual environment that these chickens are kept in.  And
>> that the high producers, when gathered together in these groups, somehow
>> failed to produce as many eggs as expected.
>>
>> So researchers decided to apply the fitness function to *groups *of
>> chickens, rather than individuals.  This would perhaps account for social
>> traits that are generally unknown, but may affect how many eggs were laid.
>>  In fact, the researchers didn't care what those traits are, only that -
>> whatever they may be - they are preserved in future generations in a way
>> that increased production.
>>
>> And the experiment worked.  Groups of chickens that produced the most eggs
>> were preserved, and subsequent generations were much more productive than
>> with the traditional methods.
>>
>> Anyway, that's the story.  If anyone can provide a link, I would be very
>> grateful.  (As I recall, it wasn't a technical paper, but rather a story in
>> a more accessible venue.  Perhaps the NY Times article, or something
>> similar?)
>>
>> Thanks!
>>
>> -Ted
>>
>>
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>
>
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