On Sat, Feb 15, 2014 at 12:25 PM, Greg Von Kuster <g...@bx.psu.edu> wrote:
> Hi Peter, > > On Feb 3, 2014, at 7:01 PM, Peter Cock <p.j.a.c...@googlemail.com> wrote: > > > Moreover there is a similar problem with the matching repository > on the Test Tool Shed, > > http://testtoolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr > 2014-01-04 showing failed tests for proteomics_search_tandem_1 > 2013-12-20 showing failed tests for proteomics_search_tandem_1 > 2013-12-18 tests for blastxml_to_top_descr passed > 2013-12-17 tests for blastxml_to_top_descr passed > > > Like the same repository on the main tool shed, the above issue were fixed > for the blastxml_to_top_descr on the test tool shed in > https://bitbucket.org/galaxy/galaxy-central/commits/e3a4d4d813fdb8a34cfd6d596e0f4bbdb2d9e211 > > Great, thanks. > > -- > > Returning to the MIRA4 problem, I got a meaningful test > failure which I fixed (I hadn't set an environment variable > in the install script), but I now get only partial test output: > > http://testtoolshed.g2.bx.psu.edu/view/peterjc/mira4_assembler > ... > That's all fine, but where are the test results for mira_bait which > I would expect to pass? > > > > It looks lie the mira_bait tests results are being populated, bu > the tests are failing, not passing. This doesn't look like an > issue with the Tool Shed's install and test framework. > Confirmed - the Tool Shed issue where only partial test output was shown is fixed (did you work out why the test output was missing?). I was hoping to see a passing test, but I can now see a failing test (still something not quite right with my dependency installation script - I'll look at this next week hopefully). Thanks, Peter
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