I also had a similar issue. I thought it has to do with the hurricane in the east coat and never bothered to ask. Even small analyses (such as running the RNA-seq analysis exercise by Jeremy Goecks) were stalled; in a couple of instances for a day or more.
Thanks. Tilahun -------------------------- On Wed, Nov 7, 2012 at 2:57 PM, Larry Reiter <lrei...@uthsc.edu> wrote: > Dannon, > > Thanks for getting back to me. Both the local cloud install and the main > server are frozen. Well, not exactly frozen. I can still rename or delete > jobs, etc. I can even switch histories and such, but I can't get it to run > even simple jobs - like taking a demo file and running Fastq Groomer. I > realize the load is high today on the main server, but we were able to get > jobs to run right up until we tried to MAP using Bowtie for Illumina. At > that point, all members of the class - and me - could not go any further > (i.e. jobs are grey and never start to run). Class ended almost three > hours ago. > > Does this help? > > LTR > > > On 11/7/12 2:52 PM, Dannon Baker wrote: > > Can you describe more about what is broken with your cloud install? > > Regarding main - the server has been under heavy load today and, while it > shouldn't remain frozen, might be slow to dispatch and, depending on the > type, execute) jobs. > > -Dannon > > On Nov 7, 2012, at 1:12 PM, Larry Reiter <lrei...@uthsc.edu> > <lrei...@uthsc.edu> wrote: > > > Tried to teach a class today on ChipSeq analysis, but the local Cloud > install is broken and then the Penn server froze on us. Is there something I > should know? > > LTR > > -- > Lawrence T. Reiter, Ph.D. > Associate Professor, Department of Neurology > 855 Monroe Ave., Link 415 > Memphis, TN 38163 > 901-448-2635 (Office)901-448-7440 (FAX)901-448-7443 (Lab) > e-mail: lrei...@uthsc.edu > > Reiter Faculty Page > Reiter Citation Index > Tooth Study > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ > > > > -- > Lawrence T. Reiter, Ph.D. > Associate Professor, Department of Neurology > 855 Monroe Ave., Link 415 > Memphis, TN 38163 > > 901-448-2635 (Office) > 901-448-7440 (FAX) > 901-448-7443 (Lab) > e-mail: lrei...@uthsc.edu > > Reiter Faculty Page<http://www.uthsc.edu/neuroscience/faculty/L_Reiter.php> > Reiter Citation > Index<http://scholar.google.com/citations?user=-kaQJ14AAAAJ&hl=en> > Tooth Study <http://tinyurl.com/88f688l> > > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ >
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
