Hello,
My name is Steve Bullard and I work at the University of Iowa. I am trying to 
put up a custom track of our variants on chrom 9. I can get them to upload but 
would like to attach data to each snp similar to what you get when you click on 
those linked to dBSnp. We have our own sequencing data and also would like to 
include associated P-values and raw #'s of case control data. Is there a way to 
link the data to the Snp shown. I have been working with Robert Kuhn as my PI 
Jeff Murray is involved in the Facebase project and has contact with Bob. 
However Bob suggested I contact his staff via this link. I have attached the 
file I have been uploading to get the track basics to show up.




Thanks,
Steve Bullard


browser position chr9:99,648,149-99,664,948
track name="sequence variants" description="Lidral SNPs" visibility=2
chr9    99547538        99547539        new
chr9    99548298        99548299        rs13288951
chr9    99548343        99548344        new
chr9    99548345        99548346        new
chr9    99573817        99573818        rs12003414
chr9    99573968        99573969        rs1877431
chr9    99574227        99574228        new
chr9    99574644        99574645        rs7045465
chr9    99574825        99574826        new
chr9    99582739        99582740        new
chr9    99583247        99583248        new
chr9    99583289        99583290        new
chr9    99583297        99583298        new
chr9    99583701        99583702        rs1877432
chr9    99583962        99583963        rs34388138
chr9    11584689        11584690        rs7847663
chr9    99588440        99588441        rs1006125
chr9    99588755        99588756        rs7864322
chr9    99588834        99588835        rs7850258
chr9    99603649        99603650        rs10818094
chr9    99603674        99603675        new
chr9    99603876        99603877        new
chr9    99604313        99604314        new
chr9    99604334        99604335        new
chr9    99604657        99604658        new
chr9    99604979        99604980        new
chr9    99605277        99605278        new
chr9    99605527        99605528        new
chr9    99605634        99605635        new
chr9    99605885        99605886        new
chr9    99608297        99608298        rs1561960
chr9    99608311        99608312        rs3053747
chr9    99608497        99608498        new
chr9    99608601        99608602        rs10983826
chr9    99609101        99609102        new
chr9    99609276        99609277        new
chr9    99609352        99609353        new
chr9    99609680        99609681        new
chr9    99610435        99610436        new
chr9    99610933        99610934        rs34405641
chr9    99610938        99610939        new
chr9    99610955        99610956        rs12001689
chr9    99610957        99610958        new
chr9    99610993        99610994        new
chr9    99611037        99611038        new
chr9    99611048        99611049        rs6478403
chr9    99611263        99611264        rs7871887
chr9    99611369        99611370        new
chr9    99611809        99611810        rs10983833
chr9    99612145        99612146        new
chr9    99621845        99621846        rs6478413
chr9    99622085        99622086        new
chr9    99622213        99622214        new
chr9    99622895        99622896        rs10124220
chr9    99623016        99623017        rs1443432
chr9    99623797        99623798        new
chr9    99633003        99633004        new
chr9    99633036        99633037        rs721417
chr9    99633483        99633484        new
chr9    99633852        99633853        new
chr9    99633868        99633869        new
chr9    99635059        99635060        rs7024345
chr9    99635207        99635208        new
chr9    99635839        99635840        new
chr9    99635912        99635913        new
chr9    99635971        99635972        rs10983892
chr9    99635986        99635987        rs10983893
chr9    99636149        99636150        rs10983896
chr9    99636260        99636261        rs7043885
chr9    99636812        99636813        rs10217225
chr9    99647089        99647090        new
chr9    99647242        99647243        new
chr9    99647318        99647319        rs6478437
chr9    99647658        99647659        rs2401639
chr9    99647671        99647672        new
chr9    99647877        99647878        new
chr9    99647880        99647881        rs4743136
chr9    99648060        99648061        new
chr9    99648277        99648278        rs12378536
chr9    99648503        99648504        rs12348691
chr9    99648566        99648567        rs10759960
chr9    99648801        99648802        rs13288000
chr9    99648879        99648880        new
chr9    99648946        99648947        new
chr9    99649051        99649052        rs7873389
chr9    99649652        99649653        new
chr9    99649967        99649968        new
chr9    99650063        99650064        new
chr9    99650169        99650170        rs10818133
chr9    99650203        99650204        rs12341377
chr9    99650473        99650474        rs7851552
chr9    99650580        99650581        rs7851660
chr9    99650586        99650587        new
chr9    99650681        99650682        rs34661241
chr9    99650836        99650837        new
chr9    99651003        99651004        rs10983958
chr9    99651022        99651023        rs10983959
chr9    99651054        99651055        rs12348304
chr9    99651189        99651190        rs13295123
chr9    99651447        99651448        rs7855724
chr9    99651460        99651461        new
chr9    99651601        99651602        new
chr9    99652006        99652007        rs894672
chr9    99652091        99652092        rs894673
chr9    99652595        99652596        rs7848950
chr9    99652628        99652629        rs1348386
chr9    99652894        99652895        new
chr9    99653012        99653013        new
chr9    99653115        99653116        new
chr9    99653189        99653190        rs7032302
chr9    99653510        99653511        new
chr9    99653521        99653522        rs3758251
chr9    99653544        99653545        new
chr9    99653624        99653625        rs3834386
chr9    99653657        99653658        new
chr9    99653702        99653703        new
chr9    99653706        99653707        new
chr9    99653777        99653778        rs10046805
chr9    99653956        99653957        new
chr9    99653961        99653962        rs3758249
chr9    99654009        99654010        rs10983975
chr9    99654041        99654042        new
chr9    99654042        99654042        rs34618971
chr9    99654051        99654052        new
chr9    99654053        99654054        rs4743137
chr9    99654117        99654118        rs4743138
chr9    99654152        99654153        new
chr9    99654422        99654423        rs3758248
chr9    99654472        99654473        new
chr9    99654814        99654815        new
chr9    99654821        99654822        new
chr9    99654938        99654939        rs907577
chr9    99654943        99654944        rs3758246
chr9    99655022        99655023        new
chr9    99655180        99655181        rs907576
chr9    99655373        99655374        new
chr9    99655374        99655375        rs13302470
chr9    99655435        99655436        new
chr9    99655481        99655482        rs7849497
chr9    99655735        99655736        rs1867277
chr9    99655770        99655771        rs1867278
chr9    99655862        99655863        rs1867279
chr9    99655882        99655883        new
chr9    99655887        99655888        rs1867280
chr9    99656086        99656087        new
chr9    99656193        99656194        new
chr9    99656227        99656228        new
chr9    99656404        99656405        rs3021523
chr9    99656413        99656414        new
chr9    99656488        99656489        new
chr9    99656521        99656522        rs3021524
chr9    99656527        99656528        new
chr9    99656539        99656540        rs11279082
chr9    99656584        99656585        new
chr9    99656602        99656603        new
chr9    99656640        99656641        new
chr9    99656731        99656732        rs3021525
chr9    99656842        99656843        rs3021526
chr9    99657196        99657197        rs7046645
chr9    99657254        99657255        rs7043516
chr9    99657300        99657301        rs1443434
chr9    99657404        99657405        rs1443435
chr9    99657470        99657471        new
chr9    99657770        99657771        new
chr9    99658399        99658400        new
chr9    99658481        99658482        rs10984009
chr9    99658914        99658915        rs35814047
chr9    99658986        99658987        new
chr9    99659211        99659212        new
chr9    99659382        99659383        rs925485
chr9    99659540        99659541        rs12347191
chr9    99659554        99659555        rs925486
chr9    99659899        99659900        rs35828132
chr9    99660147        99660148        rs1465965
chr9    99660233        99660234        rs4460498
chr9    99660551        99660552        rs973473
chr9    99660797        99660798        rs10692356
chr9    99660821        99660822        new
chr9    99660823        99660824        rs7044478
chr9    99661207        99661208        rs1912998
chr9    99661747        99661748        rs907582
chr9    99661939        99661940        rs874004
chr9    99662010        99662011        rs907581
chr9    99662114        99662115        new
chr9    99662385        99662386        new
chr9    99662418        99662419        rs907580
chr9    99662544        99662545        rs907579
chr9    99662704        99662705        rs907578
chr9    99663198        99663199        rs993501
chr9    99663311        99663312        new
chr9    99663387        99663388        rs12342888
chr9    99665464        99665465        new
chr9    99676219        99676220        rs925487
chr9    99676802        99676803        rs7850450
chr9    99676945        99676946        new
chr9    99677160        99677161        rs10119795
chr9    99677680        99677681        rs10123699
chr9    99678241        99678242        rs4743139
chr9    99678290        99678291        new
chr9    99678339        99678340        rs10984098
chr9    99678426        99678427        rs11330616
chr9    99678886        99678887        rs12342417
chr9    99679096        99679097        rs10984103
_______________________________________________
Genome maillist  -  [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome

Reply via email to