Thank you very much Katrina. Best, ________________________________________________________________ Eduardo Gade Gusmão
Em 8 de setembro de 2011 20:37, Katrina Learned <[email protected]>escreveu: > Hi Eduardo, > > I wanted to let you know that the updated md5sum.txt for the Broad Histone > track on hg19 is now on hgdownload: > http://hgdownload.cse.ucsc.**edu/goldenPath/hg19/encodeDCC/** > wgEncodeBroadHistone/md5sum.**txt<http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeBroadHistone/md5sum.txt> > > > Please contact the mail list ([email protected]) again if you have any > further questions. > > Katrina Learned > UCSC Genome Bioinformatics Group > > On 9/2/11 12:46 PM, Katrina Learned wrote: > >> Hi Eduardo, >> >> Thanks for bringing this to our attention. It looks like some of the >> files were updated, but we forgot to update the md5sum.txt. We will get >> this fixed as soon as we can. >> >> For now, please see the md5sum.txt on our genome-preview site >> (http://hgdownload-test.cse.**ucsc.edu/goldenPath/hg19/**encodeDCC/** >> wgEncodeBroadHistone/md5sum.**txt<http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeBroadHistone/md5sum.txt> >> ) >> which was generated more recently. There may be additional (not yet >> released) files, but the files that you downloaded from our main public >> site should also be listed. >> >> Genome-preview allows users to preview tracks before they have been >> through our quality assurance process. Because genome-preview contains >> pre-release data, please use discretion when downloading and viewing >> data from genome-preview as it may still be undergoing changes and >> improvements. >> >> Please contact the mail list ([email protected]) again if you have any >> further questions. >> >> Katrina Learned >> UCSC Genome Bioinformatics Group >> >> >> On 9/2/11 8:37 AM, Eduardo Gade Gusmão wrote: >> >>> Hello, I am downloading .bam, .bam.bai and .bigwig files from the Broad >>> Histone track that belongs to these cell lines: HeLa S3, NHEK, HUVEC, >>> K562, >>> GM12878 and H1hESC. >>> That's the link I am using: >>> http://hgdownload.cse.ucsc.**edu/goldenPath/hg19/encodeDCC/** >>> wgEncodeBroadHistone/<http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeBroadHistone/> >>> >>> The problem is that ALL of the .bigwig files that I have downloaded are >>> failing through the MD5 sumcheck based on the md5sum.txt file that is >>> also >>> available at that link. >>> I was downloading with wget command in linux. I also tried to download a >>> single .bigwig with various browsers and with a high trusted connection, >>> but >>> .bigwig always fails the sumcheck. >>> Other evidence that support that the problem is not in my connection is >>> that >>> I have downloaded the same kinds of file for the Duke DNaseI HS track and >>> all the files passed the sumcheck. And even the .bam files from the Broad >>> Histone track (that are as the same length in average as .bigwig) are >>> passing the sumcheck. >>> >>> Is there any chance that your generated MD5sumcheck code is wrong? Can >>> you >>> please check again your md5sum.txt file? >>> >>> Thank you! >>> ______________________________**______________________________**____ >>> Eduardo Gade Gusmão >>> ______________________________**_________________ >>> Genome maillist - [email protected] >>> https://lists.soe.ucsc.edu/**mailman/listinfo/genome<https://lists.soe.ucsc.edu/mailman/listinfo/genome> >>> >> ______________________________**_________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/**mailman/listinfo/genome<https://lists.soe.ucsc.edu/mailman/listinfo/genome> >> > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
